RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 RPS26P62854 115 aaKnown RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ITGADQ13349 1161 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 GNA13Q14344 377 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 TOMM34Q15785 309 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SFRP5Q5T4F7 317 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SAXO2Q658L1 398 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ATG16L1Q676U5 607 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 TFAP2EQ6VUC0 442 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF704Q6ZNC4 412 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMPPEQ6ZT21 453 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 WFDC8Q8IUA0 241 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 TUSC5Q8IXB3 177 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 CMIPQ8IY22 773 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 CLECL1Q8IZS7 167 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 GABRG1Q8N1C3 465 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF619Q8N2I2 560 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 GLB1L3Q8NCI6 653 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ATP6V1C2Q8NEY4 427 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ABHD3Q8WU67 409 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 NUDT8Q8WV74 236 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 KISS1RQ969F8 398 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ROPN1LQ96C74 230 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZHX1-C8orf76Q96EF9 292 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 NEURL3Q96EH8 262 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 PPP1R36Q96LQ0 422 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SORT1Q99523 831 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZBTB18Q99592 522 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 SRXN1Q9BYN0 137 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 NUF2Q9BZD4 464 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 GSX2Q9BZM3 304 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ESRP2Q9H6T0 727 aaKnown RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 C12orf49Q9H741 205 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 EXOSC3Q9NQT5 275 aaKnown RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ACER3Q9NUN7 267 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 EMC3Q9P0I2 261 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 MARCOQ9UEW3 520 aaPredicted RBP9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 MKLN1Q9UL63 735 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 WDR45Q9Y484 360 aa9.69□□□□□ -0.86
VTI1BP3-201ENST00000550220 ESPNB1AK53 854 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SULT2B1O00204 365 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 OIP5O43482 229 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 DNPH1O43598 174 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 KIAA0513O60268 411 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 CYTIPO60759 359 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 GCM2O75603 506 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 UBTFL6P0CB48 400 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 UQCRBP14927 111 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 BGNP21810 368 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 LOXP28300 417 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SHC1P29353 583 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 PGM1P36871 562 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SESN3P58005 492 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 KCNJ10P78508 379 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 RASGEF1BQ0VAM2 473 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 MERTKQ12866 999 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 PDK3Q15120 406 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 FAM174BQ3ZCQ3 159 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SYT14P1Q58G82 188 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 Q5PR19 223 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 ADAM5Q6NVV9 412 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 Q6ZT83 130 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 C22orf34Q6ZV56 151 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 P2RY8Q86VZ1 359 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 ANKRD46Q86W74 232 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF611Q8N823 705 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF563Q8TA94 476 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 RAB3IL1Q8TBN0 382 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMEM171Q8WVE6 324 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 S100PBPQ96BU1 408 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 CCDC115Q96NT0 180 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 TRNT1Q96Q11 434 aaKnown RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 HS3ST6Q96QI5 342 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR5B2Q96R09 309 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 PAIP2Q9BPZ3 127 aaKnown RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SLC35A5Q9BS91 424 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMEM204Q9BSN7 226 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 C20orf27Q9GZN8 174 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 SERHL2Q9H4I8 314 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 COQ10BQ9H8M1 238 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 HDGFL3Q9Y3E1 203 aa9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 V9GYY5 206 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 MAP1AP78559 2803 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP3-201ENST00000550220 ARID1AO14497 2285 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 GPR171O14626 319 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 HS3ST1O14792 307 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 HDAC3O15379 428 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 KRT75O95678 551 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 ADAP00813 363 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 IL6P05231 212 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 PGRP06401 933 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 CD3EP07766 207 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR3A2P47893 321 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 DIO1P49895 249 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms