RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HRGP04196 525 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GUSBP08236 651 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 NUDT7P0C024 238 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 TFPTP0C1Z6 253 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 ARAFP10398 606 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 PEPDP12955 493 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 TPD52P55327 224 aaPredicted RBP12.08□□□□□ -0.48
NUP188-211ENST00000550219 B3GALT5-AS1P59052 145 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 DSTNP60981 165 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 LIPEQ05469 1076 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 RBBP4Q09028 425 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 FUT5Q11128 374 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 MAPK11Q15759 364 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 DECR1Q16698 335 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 ARHGAP11BQ3KRB8 267 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GCNT6Q5T4J0 391 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 ASRGL1Q7L266 308 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 FBXO30Q8TB52 745 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GPR151Q8TDV0 419 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 RNF138Q8WVD3 245 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 XAGE5Q8WWM1 108 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 FIG4Q92562 907 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 JADE3Q92613 823 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 RAB8BQ92930 207 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 DACH2Q96NX9 599 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 UCN2Q96RP3 112 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 PINK1Q9BXM7 581 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GSX1Q9H4S2 264 aaPredicted RBP12.08□□□□□ -0.48
NUP188-211ENST00000550219 PLEKHF2Q9H8W4 249 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 A4GALTQ9NPC4 353 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 EXD2Q9NVH0 621 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 PRPF19Q9UMS4 504 aaKnown RBP12.08□□□□□ -0.48
NUP188-211ENST00000550219 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 LIPT1Q9Y234 373 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 ANKHD1Q8IWZ3 2542 aaKnown RBP12.08□□□□□ -0.48
NUP188-211ENST00000550219 MED12Q93074 2177 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 A0A1W2PPR1 153 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 A8MXE2 369 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 FAM220BPB1ANY3 271 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 GSC2O15499 205 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 DNAJC8O75937 253 aaPredicted RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 KCNK2O95069 426 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 GOSR1O95249 250 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 HSD17B1P14061 328 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 GSK3BP49841 420 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 ADAM8P78325 824 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 FXNQ16595 210 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 SAMD4BQ5PRF9 694 aaKnown RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 ATAD3BQ5T9A4 648 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 OR2A2Q6IF42 318 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 GALNT10Q86SR1 603 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 MARCH3Q86UD3 253 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 METTL25Q8N6Q8 603 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 COX18Q8N8Q8 333 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 WFDC11Q8NEX6 87 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 SLC38A5Q8WUX1 472 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 PIK3R3Q92569 461 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 CDS1Q92903 461 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 OTUB1Q96FW1 271 aaPredicted RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 REXO5Q96IC2 774 aaKnown RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 TRNT1Q96Q11 434 aaKnown RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 SDF2Q99470 211 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 CADM1Q9BY67 442 aaKnown RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 TBL1XR1Q9BZK7 514 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 RTN4RQ9BZR6 473 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 OPN3Q9H1Y3 402 aaPredicted RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 ALG2Q9H553 416 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 PTGES2Q9H7Z7 377 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 SDHAF3Q9NRP4 125 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 KLHL28Q9NXS3 571 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 ADA2Q9NZK5 511 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 C6orf203Q9P0P8 240 aaPredicted RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 GMPR2Q9P2T1 348 aaKnown RBP12.07□□□□□ -0.48
NUP188-211ENST00000550219 NDRG3Q9UGV2 375 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 TESMINQ9Y4I5 508 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 SPG11Q96JI7 2443 aa12.07□□□□□ -0.48
NUP188-211ENST00000550219 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 SHISA8B8ZZ34 492 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 FADS1O60427 444 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 IL33O95760 270 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 LCN1P31025 176 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 PCGF2P35227 344 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 KCNJ5P48544 419 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 CLK3P49761 638 aaKnown RBP12.06□□□□□ -0.48
NUP188-211ENST00000550219 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
NUP188-211ENST00000550219 CLDN20P56880 219 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 POU6F2P78424 691 aaPredicted RBP12.06□□□□□ -0.48
NUP188-211ENST00000550219 FAM27E3Q08E93 113 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 CEACAM7Q14002 265 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 GANABQ14697 944 aaKnown RBP12.06□□□□□ -0.48
NUP188-211ENST00000550219 CYP51A1Q16850 503 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.06□□□□□ -0.48
NUP188-211ENST00000550219 DCST2Q5T1A1 773 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 PRAMEF8Q5VWM4 474 aa12.06□□□□□ -0.48
NUP188-211ENST00000550219 PRAMEF7Q5VXH5 474 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms