RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SHARPINQ9H0F6 387 aa8.68□□□□□ -1.02
TRAFD1-207ENST00000550051 SIRT3Q9NTG7 399 aaPredicted RBP8.68□□□□□ -1.02
TRAFD1-207ENST00000550051 BAIAP2L1Q9UHR4 511 aa8.68□□□□□ -1.02
TRAFD1-207ENST00000550051 DTNAQ9Y4J8 743 aa8.68□□□□□ -1.02
TRAFD1-207ENST00000550051 SLC25A15Q9Y619 301 aa8.68□□□□□ -1.02
TRAFD1-207ENST00000550051 IGHV3-15A0A0B4J1V0 119 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 C9JVG2 144 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF264O43296 627 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 AKAP10O43572 662 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 LMX1BO60663 402 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 CRCPO75575 148 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 CSF3P09919 207 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 DHRS4L1P0CG22 281 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 MYL2P10916 166 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 BMP4P12644 408 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 DDX5P17844 614 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 USF1P22415 310 aaPredicted RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 CD40P25942 277 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ASMTP46597 345 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 EFNA4P52798 201 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 LASP1Q14847 261 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 CFAP157Q5JU67 520 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF544Q6NX49 715 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 SLC22A25Q6T423 547 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 KLHL17Q6TDP4 642 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 TMPPEQ6ZT21 453 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 TRMT10CQ7L0Y3 403 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 SZRD1Q7Z422 152 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 R3HCC1LQ7Z5L2 792 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 GALNT5Q7Z7M9 940 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 MTDHQ86UE4 582 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF100Q8IYN0 542 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF525Q8N782 197 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 TOR1AIP2Q8NFQ8 470 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 PSMA8Q8TAA3 256 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 FBXO30Q8TB52 745 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 MZB1Q8WU39 189 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF775Q96BV0 537 aaPredicted RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 TSSK3Q96PN8 268 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF300Q96RE9 604 aaPredicted RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 INPP5KQ9BT40 448 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 C19orf24Q9BVV8 132 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ACTRT3Q9BYD9 372 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ANKZF1Q9H8Y5 726 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ZCCHC3Q9NUD5 404 aaKnown RBP8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 ATP6V1HQ9UI12 483 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 TMED5Q9Y3A6 229 aa8.67□□□□□ -1.02
TRAFD1-207ENST00000550051 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■■■■□ 24.3
TRAFD1-207ENST00000550051 VWC2LB2RUY7 222 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 LSM1O15116 133 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 PROCP04070 461 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 KRT16P08779 473 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 NEFHP12036 1026 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 FKBP2P26885 142 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 APOBEC3AP31941 199 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CCT3P49368 545 aaKnown RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 GZMKP49863 264 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 DIO1P49895 249 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 FABP6P51161 128 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CSNK2A1P68400 391 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CHRNB3Q05901 458 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CBFBQ13951 182 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 QPRTQ15274 297 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 GABRA6Q16445 453 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CCDC153Q494R4 210 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 TIGD2Q4W5G0 525 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 DCST2Q5T1A1 773 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 AP1ARQ63HQ0 302 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 CLEC6AQ6EIG7 209 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OR7E24Q6IFN5 339 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 C3orf33Q6P1S2 294 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 NATD1Q8N6N6 113 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OR2T11Q8NH01 316 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OR2W6PQ8NHA6 318 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 ADAMTS15Q8TE58 950 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OR5P2Q8WZ92 322 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 ST8SIA1Q92185 356 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 JADE3Q92613 823 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OTUB1Q96FW1 271 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OR5B2Q96R09 309 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 SDF2Q99470 211 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 LAT2Q9GZY6 243 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 TUBB1Q9H4B7 451 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 SERINC1Q9NRX5 453 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 OXSMQ9NWU1 459 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 ASB6Q9NWX5 421 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 EMC3Q9P0I2 261 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 FAF1Q9UNN5 650 aaPredicted RBP8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 PTGDR2Q9Y5Y4 395 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 PMF1-BGLAPU3KQ54 211 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 ARFGEF3Q5TH69 2177 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 SVEP1Q4LDE5 3571 aa8.66□□□□□ -1.02
TRAFD1-207ENST00000550051 A0A1W2PPM1 405 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 CIB4A0PJX0 185 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms