RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 DRD2P14416 443 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 CXCL3P19876 107 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 TMEM163Q8TC26 289 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 LCN9Q8WX39 176 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 MS4A6EQ96DS6 147 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 NARFLQ9H6Q4 476 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 C20orf141Q9NUB4 165 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 CHST2Q9Y4C5 530 aa10.28□□□□□ -0.76
LINC00661-204ENST00000549354 SPTY2D1-AS1A0A0U1RR47 76 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 TNFP01375 233 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 TFPIP10646 304 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ENPP1P22413 925 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 CENPAP49450 140 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 PPP3R1P63098 170 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 EIF2B5Q13144 721 aaKnown RBP10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF267Q14586 743 aaPredicted RBP10.27□□□□□ -0.76
LINC00661-204ENST00000549354 OCLNQ16625 522 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 TP53I3Q53FA7 332 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ENTPD8Q5MY95 495 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 SIRT6Q8N6T7 355 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 OR6K6Q8NGW6 343 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 OR4Q3Q8NH05 313 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF431Q8TF32 576 aaPredicted RBP10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ZMYND19Q96E35 227 aaPredicted RBP10.27□□□□□ -0.76
LINC00661-204ENST00000549354 MS4A3Q96HJ5 214 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 TMEM43Q9BTV4 400 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.76
LINC00661-204ENST00000549354 ACSS1Q9NUB1 689 aaPredicted RBP10.27□□□□□ -0.76
LINC00661-204ENST00000549354 A0A087WV48 116 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 C4orf47A7E2U8 309 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 EIF4EP06730 217 aaKnown RBP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ZNF250P15622 560 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 GABRA5P31644 462 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ACTR1BP42025 376 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ACTR1AP61163 376 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 UBE2IP63279 158 aaKnown RBP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 TEKQ02763 1124 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 GAS6Q14393 721 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 TMEM201Q5SNT2 666 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 CCDC28AQ8IWP9 274 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 LINC00471Q8N535 108 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 TMEM99Q8N816 258 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 MORN4Q8NDC4 146 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 NT5CQ8TCD5 201 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ARHGAP9Q9BRR9 750 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 THAP7Q9BT49 309 aaPredicted RBP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 SLC25A18Q9H1K4 315 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 TNFRSF10DQ9UBN6 386 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 SPATA2Q9UM82 520 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 CACNA1GO43497 2377 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 A0A1W2PPC4 97 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ZNF217O75362 1048 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 UBXN7O94888 489 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 HRGP04196 525 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 STARD6P59095 220 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 E2F1Q01094 437 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 COX10Q12887 443 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 SIGIRRQ6IA17 410 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ABHD17CQ6PCB6 329 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 GPR135Q8IZ08 494 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 FAM109AQ8N4B1 249 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 RFLNBQ8N5W9 214 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 AKAP1Q92667 903 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 TM4SF19Q96DZ7 209 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 LMAN1LQ9HAT1 526 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 NEUROD4Q9HD90 331 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 HINT3Q9NQE9 182 aaKnown RBP10.27□□□□□ -0.77
LINC00661-204ENST00000549354 C2orf42Q9NWW7 574 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 ASB4Q9Y574 426 aa10.27□□□□□ -0.77
LINC00661-204ENST00000549354 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 A0A1W2PRQ8 180 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 IDSB3KWA1 339 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 NUPL2O15504 423 aaKnown RBP10.26□□□□□ -0.77
LINC00661-204ENST00000549354 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 GIFP27352 417 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 TALDO1P37837 337 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 SOX2P48431 317 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 GAS1P54826 345 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 SMIM11AP58511 58 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 BNC1Q01954 994 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 FZD2Q14332 565 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 KCNAB1Q14722 419 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 PXDC1Q5TGL8 231 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 OR2L5Q8NG80 312 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 OR11H4Q8NGC9 324 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 OR13C2Q8NGS9 318 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 OR4K13Q8NH42 304 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 OR7D2Q96RA2 312 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 GON7Q9BXV9 100 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 PCED1AQ9H1Q7 454 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 POT1Q9NUX5 634 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 AK6Q9Y3D8 172 aaKnown RBP10.26□□□□□ -0.77
LINC00661-204ENST00000549354 WDR45Q9Y484 360 aa10.26□□□□□ -0.77
LINC00661-204ENST00000549354 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms