RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	VN1R1	Q9GZP7	353 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC5A7	Q9GZV3	580 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	PIGV	Q9NUD9	493 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	NINJ2	Q9NZG7	142 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	VPS18	Q9P253	973 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	RHCG	Q9UBD6	479 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	SEC14L3	Q9UDX4	400 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	LAMP5	Q9UJQ1	280 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	DNPEP	Q9ULA0	475 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	AURKC	Q9UQB9	309 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	RPH3A	Q9Y2J0	694 aa	Predicted RBP	2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	COL6A5	A8TX70	2615 aa		2.88	□□□□□ -1.95
RPAP3-205	ENST00000548211	SPTB	P11277	2137 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	HIVEP2	P31629	2446 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TRAV17	A0A0B4J275	112 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211		A0A1W2PN81	502 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TLCD2	A6NGC4	264 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211		H0YC42	278 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	UBXN8	O00124	270 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	ADAMDEC1	O15204	470 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	POLR2D	O15514	142 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	VEGFD	O43915	354 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	HS6ST1	O60243	411 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC19A2	O60779	497 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TSC22D2	O75157	780 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	AVIL	O75366	819 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	GRAP2	O75791	330 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	LETM1	O95202	739 aa	Predicted RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CD160	O95971	181 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM11	P17152	192 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	VCL	P18206	1134 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	GABRB1	P18505	474 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	HNRNPH3	P31942	346 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SOAT1	P35610	550 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CHRNA7	P36544	502 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CASP3	P42574	277 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	RAB28	P51157	221 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	GFER	P55789	205 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	NME5	P56597	212 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	KCNK10	P57789	538 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	STX1B	P61266	288 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	AP1S1	P61966	158 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CX3CL1	P78423	397 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARG2	P78540	354 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SQLE	Q14534	574 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	RFTN1	Q14699	578 aa	Predicted RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	FASTKD3	Q14CZ7	662 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PDK1	Q15118	436 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CEBPE	Q15744	281 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	HYAL4	Q2M3T9	481 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TYSND1	Q2T9J0	566 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC25A52	Q3SY17	297 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CCDC40	Q4G0X9	1142 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC25A53	Q5H9E4	307 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TEX35	Q5T0J7	233 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CCDC183	Q5T5S1	534 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	KCTD16	Q68DU8	428 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	KIAA0930	Q6ICG6	404 aa	Predicted RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	IGFL2	Q6UWQ7	119 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	ISLR2	Q6UXK2	745 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	FAM92B	Q6ZTR7	304 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PAQR7	Q86WK9	346 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	KIRREL3	Q8IZU9	778 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CLYBL	Q8N0X4	340 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	BBS5	Q8N3I7	341 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	RTL3	Q8N8U3	475 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	AQP11	Q8NBQ7	271 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CAMKV	Q8NCB2	501 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	KIAA0895	Q8NCT3	520 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	C17orf47	Q8NEP4	570 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	BRSK1	Q8TDC3	778 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PHF10	Q8WUB8	498 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SHC3	Q92529	594 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	AP2M1	Q96CW1	435 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	ECHDC3	Q96DC8	303 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	CXorf40B	Q96DE9	158 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	DTD2	Q96FN9	168 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	RMND5B	Q96G75	393 aa	Predicted RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	FAM111A	Q96PZ2	611 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	NPY6R	Q99463	290 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PAFAH2	Q99487	392 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TSG101	Q99816	390 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	MGME1	Q9BQP7	344 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	SRSF8	Q9BRL6	282 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	NUP85	Q9BW27	656 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	MRPL1	Q9BYD6	325 aa	Known RBP	2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	BLZF1	Q9H2G9	400 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	DPH5	Q9H2P9	285 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PLK3	Q9H4B4	646 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	VPS37B	Q9H9H4	285 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	POLE3	Q9NRF9	147 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	ABCB10	Q9NRK6	738 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	P4HTM	Q9NXG6	502 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	EXTL2	Q9UBQ6	330 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	OR12D3	Q9UGF7	316 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	PPP2R2C	Q9Y2T4	447 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	TACC2	O95359	2948 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	AKAP6	Q13023	2319 aa		2.87	□□□□□ -1.95
RPAP3-205	ENST00000548211	FLNA	P21333	2647 aa	Known RBP	2.87	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms