RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RLIMQ9NVW2 624 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 CORO2BQ9UQ03 480 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 FBP2O00757 339 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 CXCL13O43927 109 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 ARAFP10398 606 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 IGFBP2P18065 325 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 SLC6A8P48029 635 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 SELENBP1Q13228 472 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 NFYCQ13952 458 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 TMEM176BQ3YBM2 270 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 LIN52Q52LA3 116 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 PRAMEF8Q5VWM4 474 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 PRAMEF7Q5VXH5 474 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 HBMQ6B0K9 141 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 OR2A2Q6IF42 318 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 MEX3BQ6ZN04 569 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF836Q6ZNA1 936 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF563Q8TA94 476 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 ANKRD27Q96NW4 1050 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 CGREF1Q99674 301 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 SFXN3Q9BWM7 321 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 RNF122Q9H9V4 155 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 PAQR5Q9NXK6 330 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 CACNA1DQ01668 2161 aa16.81■□□□□ 0.28
PRPF40B-206ENST00000547764 CDHR4A6H8M9 788 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 GJE1A6NN92 205 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 AP3D1O14617 1153 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 AQP8O94778 261 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 PGM3O95394 542 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 IDH2P48735 452 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 ASCL1P50553 236 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 DLX5P56178 289 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 CARD18P57730 90 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 EEF1A1P68104 462 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 MERTKQ12866 999 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 PDSS1Q5T2R2 415 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 PPP4R4Q6NUP7 873 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 PLEKHM3Q6ZWE6 761 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 NFKBIDQ8NI38 313 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 BBS10Q8TAM1 723 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 OSTF1Q92882 214 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 JKAMPQ9P055 326 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF232Q9UNY5 417 aa16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF443Q9Y2A4 671 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-206ENST00000547764 A0A1W2PNV4 684 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 SYT5O00445 386 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 EEF1E1O43324 174 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 TNFSF13O75888 250 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CRHP06850 196 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 THBS1P07996 1170 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 FCGR2AP12318 317 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 SEC24CP53992 1094 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 MTPNP58546 118 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CDK6Q00534 326 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 SELPLGQ14242 412 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 LARS2Q15031 903 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 ADRM1Q16186 407 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 FBXL19-AS1Q494R0 122 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 RNF220Q5VTB9 566 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 REEP3Q6NUK4 255 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CLIP4Q8N3C7 705 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CCDC106Q9BWC9 280 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 PRRG4Q9BZD6 226 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 TMEM38AQ9H6F2 299 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CACYBPQ9HB71 228 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 SERINC1Q9NRX5 453 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 MCTS1Q9ULC4 181 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 IFT52Q9Y366 437 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 CHST2Q9Y4C5 530 aa16.79■□□□□ 0.28
PRPF40B-206ENST00000547764 SYNGR4O95473 234 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 PABPC4LP0CB38 370 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 GKN3PP0CG01 181 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 PRF1P14222 555 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 ETS2P15036 469 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 ADSLP30566 484 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 UQCRC1P31930 480 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 APOBEC1P41238 236 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 KIR2DL2P43627 348 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 GYS2P54840 703 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 EPS8Q12929 822 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 CAPRIN1Q14444 709 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF311Q5JNZ3 666 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 EEF1A1P5Q5VTE0 462 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 C3orf33Q6P1S2 294 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 GRINAQ7Z429 371 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 MCEMP1Q8IX19 187 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 DMRTC2Q8IXT2 367 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF440Q8IYI8 595 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 CNEP1R1Q8N9A8 125 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 RNASE6Q93091 150 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 SPATA9Q9BWV2 254 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 SRXN1Q9BYN0 137 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 COQ10BQ9H8M1 238 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 CTPS2Q9NRF8 586 aa16.78■□□□□ 0.28
PRPF40B-206ENST00000547764 ARMCX1Q9P291 453 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms