RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF775Q96BV0 537 aaPredicted RBP11.86□□□□□ -0.51
CPSF6-204ENST00000547486 SLC35G5Q96KT7 338 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 Q96MF0 132 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF350Q9GZX5 532 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 OR10A4Q9H209 315 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 H7C1Q1 480 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 SMAD9O15198 467 aaKnown RBP11.85□□□□□ -0.51
CPSF6-204ENST00000547486 TM9SF1O15321 606 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 AK1P00568 194 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CSTAP01040 98 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 UBTFL6P0CB48 400 aaPredicted RBP11.85□□□□□ -0.51
CPSF6-204ENST00000547486 UQCRC2P22695 453 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 PGM1P36871 562 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 NME5P56597 212 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 PLAURQ03405 335 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 SELENBP1Q13228 472 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 STX3Q13277 289 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CASP8Q14790 479 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 SPANXN4Q5MJ08 99 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 SAXO2Q658L1 398 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 TNFAIP8L2Q6P589 184 aaPredicted RBP11.85□□□□□ -0.51
CPSF6-204ENST00000547486 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CLEC9AQ6UXN8 241 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 C16orf62Q7Z3J2 963 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 ATG4DQ86TL0 474 aaPredicted RBP11.85□□□□□ -0.51
CPSF6-204ENST00000547486 STEAP2Q8NFT2 490 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 TESCQ96BS2 214 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 PSD2Q9BQI7 771 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 HDHD5Q9BXW7 423 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 SAP130Q9H0E3 1048 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 BCO1Q9HAY6 547 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 GP6Q9HCN6 339 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 KCNK9Q9NPC2 374 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 FANCFQ9NPI8 374 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 RAB21Q9UL25 225 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
CPSF6-204ENST00000547486 CLDN24A6NM45 220 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 KIAA0513O60268 411 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ADAM11O75078 769 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 LY6G6DO95868 133 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 GUSBP08236 651 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ALDOCP09972 364 aaKnown RBP11.84□□□□□ -0.51
CPSF6-204ENST00000547486 LBPP18428 481 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 IL12AP29459 219 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 SLC7A1P30825 629 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 PTH2RP49190 550 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 NR1H2P55055 460 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 UFM1P61960 85 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 BST1Q10588 318 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 TAB1Q15750 504 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ANXA8L1Q5VT79 327 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 SEZ6L2Q6UXD5 910 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 FRRS1Q6ZNA5 592 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 EIF3MQ7L2H7 374 aaKnown RBP11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF619Q8N2I2 560 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 FAM71CQ8NEG0 241 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ST8SIA1Q92185 356 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ROPN1LQ96C74 230 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 NEURL3Q96EH8 262 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 OR5B2Q96R09 309 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF300Q96RE9 604 aaPredicted RBP11.84□□□□□ -0.51
CPSF6-204ENST00000547486 MEAF6Q9HAF1 191 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 EXD2Q9NVH0 621 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 PRSS50Q9UI38 385 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 WDR45Q9Y484 360 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 PRR14LQ5THK1 2151 aa11.84□□□□□ -0.51
CPSF6-204ENST00000547486 HMGN4O00479 90 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 SDHDO14521 159 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 HS3ST1O14792 307 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 SMAD7O15105 426 aaKnown RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 CYTIPO60759 359 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 SNUPNO95149 360 aaKnown RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 PAX1P15863 534 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 S100A3P33764 101 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 RYKP34925 604 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 OR3A2P47893 321 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 DIO1P49895 249 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 CHRNEQ04844 493 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 RASGEF1BQ0VAM2 473 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 MERTKQ12866 999 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 C3orf33Q6P1S2 294 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 TMPPEQ6ZT21 453 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 ZNF611Q8N823 705 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 AKAP1Q92667 903 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPSF6-204ENST00000547486 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 CCDC115Q96NT0 180 aa11.83□□□□□ -0.52
CPSF6-204ENST00000547486 PAIP2Q9BPZ3 127 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms