RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 DCST1Q5T197 706 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 HMBOX1Q6NT76 420 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 SHQ1Q6PI26 577 aaKnown RBP14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 GRINAQ7Z429 371 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 GDF7Q7Z4P5 450 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 GALNTL5Q7Z4T8 443 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 SULF2Q8IWU5 870 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 ICA1LQ8NDH6 482 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 RNF217Q8TC41 542 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 EXTL1Q92935 676 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 EME1Q96AY2 570 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 ZBTB8AQ96BR9 441 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 MRGPRX4Q96LA9 322 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 ARHGAP9Q9BRR9 750 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 PRR14Q9BWN1 585 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 SEMA6AQ9H2E6 1030 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 KRCC1Q9NPI7 259 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 CTPS2Q9NRF8 586 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 DEPPQ9NTK1 212 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 TUBA8Q9NY65 449 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 RHCGQ9UBD6 479 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 NKX1-2Q9UD57 310 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 DKKL1Q9UK85 242 aa14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 MRPS18CQ9Y3D5 142 aaKnown RBP14.4□□□□□ -0.1
TRAFD1-203ENST00000547063 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 HTR3EA5X5Y0 456 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ELOA3DA6NLF2 546 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 G3V2T6 193 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ACOT7O00154 380 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ETV2O00321 342 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 CASQ2O14958 399 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 GMFGO60234 142 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 FKBP2P26885 142 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 DPP4P27487 766 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ADH6P28332 368 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 SRD5A2P31213 254 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 IFNGR2P38484 337 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 APOBEC1P41238 236 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 RBM34P42696 430 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 POLR2HP52434 150 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 PLGLB1Q02325 96 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 SNCBQ16143 134 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ELOA3BQ3SY89 546 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 SLC25A53Q5H9E4 307 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 FBXW10Q5XX13 1052 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 RNF113BQ8IZP6 322 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ELOA3Q8NG57 546 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 OR52J3Q8NH60 311 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ACOT11Q8WXI4 607 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 C3orf49Q96BT1 292 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ABHD17AQ96GS6 310 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ALPK1Q96QP1 1244 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ADAM19Q9H013 955 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 VCXQ9H320 206 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 NTN4Q9HB63 628 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 MED17Q9NVC6 651 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 QPCTLQ9NXS2 382 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 FBXL2Q9UKC9 423 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 NTNG1Q9Y2I2 539 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 C15orf41Q9Y2V0 281 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 U3KQV3 271 aa14.39□□□□□ -0.11
TRAFD1-203ENST00000547063 ANKRD11Q6UB99 2663 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 C7orf72A4D263 438 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 ARRDC5A6NEK1 342 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 LRRC3CA6NJW4 275 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 C17orf51A8MQB3 221 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 CCNB2O95067 398 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 PRKCAP17252 672 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 CXCR1P25024 350 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 TACR3P29371 465 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 LIMS1P48059 325 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 MEOX1P50221 254 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 FOXO1Q12778 655 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 KCNAB2Q13303 367 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 ZNF169Q14929 603 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 INPP5JQ15735 1006 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 EXOC3L2Q2M3D2 409 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 HYAL4Q2M3T9 481 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 PLPPR5Q32ZL2 321 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 ZNF730Q6ZMV8 503 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 SLC22A16Q86VW1 577 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 TSPYL5Q86VY4 417 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 ZFP62Q8NB50 900 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 OR4C15Q8NGM1 316 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 SLC7A13Q8TCU3 470 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 GIPC3Q8TF64 312 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 GNRHR2Q96P88 292 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 SLC19A3Q9BZV2 496 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 SERINC1Q9NRX5 453 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 OAZ3Q9UMX2 235 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 VDAC3Q9Y277 283 aa14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 SPIN1Q9Y657 262 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-203ENST00000547063 A0A087WUJ7 227 aa14.37□□□□□ -0.11
TRAFD1-203ENST00000547063 A0A0G2JMM0 328 aa14.37□□□□□ -0.11
TRAFD1-203ENST00000547063 A0A1W2PPB8 328 aa14.37□□□□□ -0.11
TRAFD1-203ENST00000547063 A0A1W2PRS3 328 aa14.37□□□□□ -0.11
TRAFD1-203ENST00000547063 SAC3D1A6NKF1 404 aa14.37□□□□□ -0.11
TRAFD1-203ENST00000547063 KIR3DP1A8MWS1 328 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms