RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 EMC9Q9Y3B6 208 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 PCDHB14Q9Y5E9 798 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 PDZD2O15018 2839 aa14.25□□□□□ -0.13
DDX54-204ENST00000546898 ENO4A6NNW6 628 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 NR5A2O00482 541 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 EFNA2O43921 213 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SS18L1O75177 396 aaPredicted RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 PLGP00747 810 aaPredicted RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 OPN1LWP04000 364 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SHC1P29353 583 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 CARD18P57730 90 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SESN3P58005 492 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SIRPAP78324 504 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 ZNF239Q16600 458 aaKnown RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 PEX5LQ8IYB4 626 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 ZZZ3Q8IYH5 903 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SLC25A43Q8WUT9 341 aaPredicted RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 OSTF1Q92882 214 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 QRSL1Q9H0R6 528 aaKnown RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 COQ10BQ9H8M1 238 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 NPHS2Q9NP85 383 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SERINC1Q9NRX5 453 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 CRIM1Q9NZV1 1036 aa14.24□□□□□ -0.13
DDX54-204ENST00000546898 SPIN1Q9Y657 262 aaPredicted RBP14.24□□□□□ -0.13
DDX54-204ENST00000546898 TUBAL3A6NHL2 446 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 CLIC1O00299 241 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 SMNDC1O75940 238 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX54-204ENST00000546898 GOSR1O95249 250 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 BCHEP06276 602 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 TFPTP0C1Z6 253 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 BMP2P12643 396 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 NID1P14543 1247 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 IL7RP16871 459 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PPIBP23284 216 aaKnown RBP14.23□□□□□ -0.13
DDX54-204ENST00000546898 SLC7A1P30825 629 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 CPOXP36551 454 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 APOBEC1P41238 236 aaKnown RBP14.23□□□□□ -0.13
DDX54-204ENST00000546898 PLAURQ03405 335 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 MERTKQ12866 999 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 RGNQ15493 299 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 MAPK11Q15759 364 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 ZSWIM7Q19AV6 140 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 TMEM176BQ3YBM2 270 aaPredicted RBP14.23□□□□□ -0.13
DDX54-204ENST00000546898 LIN52Q52LA3 116 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 AGKQ53H12 422 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 HSP90B2PQ58FF3 399 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PRAMEF8Q5VWM4 474 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PRAMEF7Q5VXH5 474 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 GTF2IRD2BQ6EKJ0 949 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PLEKHM3Q6ZWE6 761 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 GRINAQ7Z429 371 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 BTLAQ7Z6A9 289 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 GTF2IRD2Q86UP8 949 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 TMEM200AQ86VY9 491 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 OR6K3Q8NGY3 331 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 ZNF563Q8TA94 476 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 RNF128Q8TEB7 428 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 ZNF524Q96C55 264 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 REXO5Q96IC2 774 aaKnown RBP14.23□□□□□ -0.13
DDX54-204ENST00000546898 SLC52A3Q9NQ40 469 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 DNAJB12Q9NXW2 375 aaKnown RBP14.23□□□□□ -0.13
DDX54-204ENST00000546898 DCTN4Q9UJW0 460 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PRDM4Q9UKN5 801 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 PROCRQ9UNN8 238 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 GMEB1Q9Y692 573 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 CCDC168Q8NDH2 2452 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 SPG11Q96JI7 2443 aa14.23□□□□□ -0.13
DDX54-204ENST00000546898 UQCRHLA0A096LP55 91 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 A0A1W2PP18 115 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 CLDN24A6NM45 220 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 FAAHO00519 579 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 BCAS1O75363 584 aaPredicted RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 CGAP01215 116 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 UQCRBP14927 111 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 NCF2P19878 526 aaPredicted RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 FKBP2P26885 142 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 HTR3AP46098 478 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 CTBP2P56545 445 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 KRTAP10-9P60411 292 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 RAC3P60763 192 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 SNTB1Q13884 538 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 RNPS1Q15287 305 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 MRPL2Q5T653 305 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 RNF220Q5VTB9 566 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 HMGN2P46Q86SG4 172 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 ZNF440Q8IYI8 595 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 SLC38A5Q8WUX1 472 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 CNOT9Q92600 299 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 THOC1Q96FV9 657 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 TMEM19Q96HH6 336 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 ZNF385DQ9H6B1 395 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 CACYBPQ9HB71 228 aaKnown RBP14.22□□□□□ -0.13
DDX54-204ENST00000546898 GP6Q9HCN6 339 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 A4GALTQ9NPC4 353 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 MED4Q9NPJ6 270 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 ELOVL5Q9NYP7 299 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 SLC25A37Q9NYZ2 338 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 CORO2BQ9UQ03 480 aa14.22□□□□□ -0.13
DDX54-204ENST00000546898 TRBV5-3A0A0A0MS03 114 aa14.21□□□□□ -0.13
DDX54-204ENST00000546898 A0A0G2JND7 137 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms