RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PSMA6P60900 246 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 BNC1Q01954 994 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 C3orf38Q5JPI3 329 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 COL13A1Q5TAT6 717 aaPredicted RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF782Q6ZMW2 699 aaPredicted RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF767PQ75MW2 155 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ABHD4Q8TB40 342 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 THAP4Q8WY91 577 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 UBE2E3Q969T4 207 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 SFXN2Q96NB2 322 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TNFRSF13CQ96RJ3 184 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 MS4A8Q9BY19 250 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 NOTCH4Q99466 2003 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 GPANK1O95872 356 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 CSNK2A2P19784 350 aaPredicted RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 MAKP20794 623 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 BCL6P41182 706 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF155Q12901 538 aaPredicted RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ERV3-1Q14264 604 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF77Q15935 545 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 OAFQ86UD1 273 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 BPHLQ86WA6 291 aaPredicted RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 MS4A15Q8N5U1 240 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 LINC01555Q8NAE3 123 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 GNPDA2Q8TDQ7 276 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ZDHHC1Q8WTX9 485 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 DHRS9Q9BPW9 319 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 MBNL1Q9NR56 388 aaKnown RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 DEC1Q9P2X7 70 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 TESQ9UGI8 421 aaKnown RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 SF3B6Q9Y3B4 125 aaKnown RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 A0A1W2PPL8 197 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 HLA-DQA2P01906 255 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ACADMP11310 421 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 ITGB7P26010 798 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 FUT5Q11128 374 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 PRSS58Q8IYP2 241 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 CLDND1Q9NY35 253 aa13.6□□□□□ -0.23
HOXC11-202ENST00000546378 FARSAQ9Y285 508 aaKnown RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 MN1Q10571 1320 aaPredicted RBP13.6□□□□□ -0.23
HOXC11-202ENST00000546378 A0A1W2PP55 124 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 RAF1P04049 648 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 PRR5P85299 388 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 MAPK14Q16539 360 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF783Q6ZMS7 281 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 RTL4Q6ZR62 310 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CREB3L2Q70SY1 520 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF511Q8NB15 262 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 MORN4Q8NDC4 146 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 OR52I2Q8NH67 350 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SMPDL3BQ92485 455 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 OR1F2PQ96R84 312 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 ARPC5LQ9BPX5 153 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TRAF4Q9BUZ4 470 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CA10Q9NS85 328 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 RABL2AQ9UBK7 228 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 FBXO9Q9UK97 447 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CBLCQ9ULV8 474 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TRABD2BA6NFA1 517 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 GPR171O14626 319 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SLC43A1O75387 559 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 EGFP01133 1207 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TMIGD3P0DMS9 266 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF30P17039 623 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 AHCYP23526 432 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 MMP12P39900 470 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TPBGQ13641 420 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 KCNC3Q14003 757 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 STK11Q15831 433 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SFTPA2Q8IWL1 248 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CDK20Q8IZL9 346 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 COX18Q8N8Q8 333 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SUSD6Q92537 303 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 LMF1Q96S06 567 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 MARVELD1Q9BSK0 173 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 LHX9Q9NQ69 397 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TRDV1A0A1B0GX56 115 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 RIIAD1A6NNX1 92 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 NPIPB8E9PQR5 432 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SLC9A3R1O14745 358 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 FGF19O95750 216 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 LGI1O95970 557 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 PIPP12273 146 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 HSF2Q03933 536 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 OCLNQ16625 522 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CDONQ4KMG0 1287 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 C4orf46Q504U0 113 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 MPP7Q5T2T1 576 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 PRSS41Q7RTY9 318 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms