RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PDLIM1O00151 329 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 COPEO14579 308 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 GPRIN2O60269 458 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 NPHS1O60500 1241 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 EIF4E2O60573 245 aaKnown RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 TRIM13O60858 407 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 UBL4AP11441 157 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 ALDH3A1P30838 453 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 CCT5P48643 541 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 CCT3P49368 545 aaKnown RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 CDH11P55287 796 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 FOXG1P55316 489 aaPredicted RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 HBA1P69905 142 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 TP53BP2Q13625 1128 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 PPA1Q15181 289 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 MAPK14Q16539 360 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 ARL13AQ5H913 290 aaPredicted RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 C6orf136Q5SQH8 315 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 PDZK1Q5T2W1 519 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 ALKBH2Q6NS38 261 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 C3orf33Q6P1S2 294 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 ZNF527Q8NB42 609 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 TRMT61AQ96FX7 289 aaKnown RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 AMBRA1Q9C0C7 1298 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 IQCGQ9H095 443 aaKnown RBP11.07□□□□□ -0.64
COPS7A-221ENST00000546229 L2HGDHQ9H9P8 463 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 NGBQ9NPG2 151 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 TRAF6Q9Y4K3 522 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 ALPK2Q86TB3 2170 aa11.07□□□□□ -0.64
COPS7A-221ENST00000546229 SERINC4A6NH21 518 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ELOA3DA6NLF2 546 aaPredicted RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ABCD4O14678 606 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ZNF264O43296 627 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 KIAA0513O60268 411 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 FCMRO60667 390 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 SCN2BO60939 215 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 UGT2B17O75795 530 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 FESP07332 822 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ATP6V1C1P21283 382 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 DIO1P49895 249 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 SESN3P58005 492 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 RASGEF1BQ0VAM2 473 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 PDK3Q15120 406 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ELOA3BQ3SY89 546 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 TIGD2Q4W5G0 525 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 EIF1ADQ8N9N8 165 aaKnown RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ELOA3Q8NG57 546 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 OR5AK3PQ8NH89 298 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 MIPOL1Q8TD10 442 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ST8SIA1Q92185 356 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 GTPBP3Q969Y2 492 aaKnown RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 APOPT1Q96IL0 206 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 C1orf50Q9BV19 199 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 CCDC106Q9BWC9 280 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 BHLHE41Q9C0J9 482 aaPredicted RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 LAT2Q9GZY6 243 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 PPCSQ9HAB8 311 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 CISD1Q9NZ45 108 aaKnown RBP11.06□□□□□ -0.64
COPS7A-221ENST00000546229 MALT1Q9UDY8 824 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 ARFGEF3Q5TH69 2177 aa11.06□□□□□ -0.64
COPS7A-221ENST00000546229 PRAMEF27A3QJZ7 478 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 C9JVG2 144 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 PEX11AO75192 247 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 NUDT14O95848 222 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 C1QCP02747 245 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 GUSBP08236 651 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ITGA5P08648 1049 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 PTNP21246 168 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 SLC7A1P30825 629 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 PGM1P36871 562 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 RPL3P39023 403 aaKnown RBP11.05□□□□□ -0.64
COPS7A-221ENST00000546229 SLC16A1P53985 500 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 SLC25A3Q00325 362 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 CBFBQ13951 182 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 STK11Q15831 433 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 TMEM249Q2WGJ8 235 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 SYT14P1Q58G82 188 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 HMBOX1Q6NT76 420 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ZCCHC23Q6ZST2 131 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 TMPPEQ6ZT21 453 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 P2RY8Q86VZ1 359 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 DDIASQ8IXT1 998 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 CLECL1Q8IZS7 167 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 CLEC4FQ8N1N0 589 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ATP6V1C2Q8NEY4 427 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ADAMTS15Q8TE58 950 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 NANOS1Q8WY41 292 aaKnown RBP11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
COPS7A-221ENST00000546229 PPP3R2Q96LZ3 170 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 OR5B2Q96R09 309 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 THUMPD3Q9BV44 507 aaKnown RBP11.05□□□□□ -0.64
COPS7A-221ENST00000546229 BARX1Q9HBU1 254 aaPredicted RBP11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ACER3Q9NUN7 267 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 ASIC5Q9NY37 505 aa11.05□□□□□ -0.64
COPS7A-221ENST00000546229 SLC17A7Q9P2U7 560 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms