RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CLDN24A6NM45 220 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 DBIP07108 87 aaKnown RBP10.65□□□□□ -0.7
YBX3-217ENST00000546164 TROVE2P10155 538 aaKnown RBP eCLIP10.65□□□□□ -0.7
YBX3-217ENST00000546164 CD1EP15812 388 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 NCF2P19878 526 aaPredicted RBP10.65□□□□□ -0.7
YBX3-217ENST00000546164 PPIBP23284 216 aaKnown RBP10.65□□□□□ -0.7
YBX3-217ENST00000546164 SLC6A8P48029 635 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 SESN3P58005 492 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 SORDQ00796 357 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 SELENBP1Q13228 472 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 SGCBQ16585 318 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 ZSWIM7Q19AV6 140 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 PDSS1Q5T2R2 415 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 DPP10Q8N608 796 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 WDR60Q8WVS4 1066 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 TMEM234Q8WY98 164 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 TMEM185BQ9H7F4 350 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 BCL2L10Q9HD36 194 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 A4GALTQ9NPC4 353 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 ACER3Q9NUN7 267 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 FGFR1OP2Q9NVK5 253 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
YBX3-217ENST00000546164 MCTS1Q9ULC4 181 aaKnown RBP10.65□□□□□ -0.7
YBX3-217ENST00000546164 MYO9AB2RTY4 2548 aa10.65□□□□□ -0.7
YBX3-217ENST00000546164 SPG11Q96JI7 2443 aa10.65□□□□□ -0.71
YBX3-217ENST00000546164 A0A0G2JPF8 293 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 TMEM247A6NEH6 219 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 A8MXE2 369 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 HNRNPCL2B2RXH8 293 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 HNRNPCL3B7ZW38 293 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 EEF1E1-BLOC1S5C9J1V9 151 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 FAAHO00519 579 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 TNFSF11O14788 317 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 MSTNO14793 375 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 EEF1E1O43324 174 aaKnown RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 CXCL13O43927 109 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 HNRNPCL1O60812 293 aaKnown RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 ADAM11O75078 769 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 CYP7B1O75881 506 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 AQP8O94778 261 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 BCHEP06276 602 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 THBS1P07996 1170 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 HNRNPCL4P0DMR1 293 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 IL7RP16871 459 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 SHC1P29353 583 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 UQCRC1P31930 480 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 KIR2DL2P43627 348 aaPredicted RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 AGFG1P52594 562 aaKnown RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 GUCY1A3Q02108 690 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 HBMQ6B0K9 141 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 CGB2Q6NT52 195 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 C3orf33Q6P1S2 294 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 DLEU7Q6UYE1 221 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 KIF18BQ86Y91 864 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 PEX5LQ8IYB4 626 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 OR52P1PQ8NH57 321 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 CNOT9Q92600 299 aaKnown RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 OSTF1Q92882 214 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 CPNE4Q96A23 557 aaPredicted RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 STARD4Q96DR4 205 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 TMEM19Q96HH6 336 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 COQ10BQ9H8M1 238 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 TIGARQ9NQ88 270 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 GLRX2Q9NS18 164 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 VAPAQ9P0L0 249 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 LEF1Q9UJU2 399 aaPredicted RBP10.64□□□□□ -0.71
YBX3-217ENST00000546164 NDUFAF1Q9Y375 327 aa10.64□□□□□ -0.71
YBX3-217ENST00000546164 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 SS18L1O75177 396 aaPredicted RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 SYNGR4O95473 234 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 CGAP01215 116 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 OPN1LWP04000 364 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 VIMP08670 466 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 PABPC4LP0CB38 370 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 CD8BP10966 210 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 GPX2P18283 190 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 FKBP2P26885 142 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 SFTPDP35247 375 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 MDH1P40925 334 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 APOBEC1P41238 236 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 CARD18P57730 90 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 ZNF239Q16600 458 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 TMEM176BQ3YBM2 270 aaPredicted RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 LIN52Q52LA3 116 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 MRPL2Q5T653 305 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 RNF220Q5VTB9 566 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 VWA1Q6PCB0 445 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 PLEKHM3Q6ZWE6 761 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 FAM214BQ7L5A3 538 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 HMGN2P46Q86SG4 172 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 ZNF440Q8IYI8 595 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 BBS10Q8TAM1 723 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 SLC25A43Q8WUT9 341 aaPredicted RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 GMPPAQ96IJ6 420 aaPredicted RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 CCDC106Q9BWC9 280 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 RBM24Q9BX46 236 aaKnown RBP10.63□□□□□ -0.71
YBX3-217ENST00000546164 PRRG4Q9BZD6 226 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 MCCC2Q9HCC0 563 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms