RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RPN2P04844 631 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ATP1B1P05026 303 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CPN1P15169 458 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 TYRP1P17643 537 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 HSD17B2P37059 387 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CSNK1G2P78368 415 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 AGERQ15109 404 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CST9Q5W186 159 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 LNX2Q8N448 690 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 PFN4Q8NHR9 129 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 GCDHQ92947 438 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 IRF7Q92985 503 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 LRIG1Q96JA1 1093 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 TTTY10Q9BZA0 68 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 AICDAQ9GZX7 198 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 KLHL31Q9H511 634 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ZCCHC4Q9H5U6 513 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 KLF15Q9UIH9 416 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ST6GALNAC2Q9UJ37 374 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ATG4BQ9Y4P1 393 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 PCYT1BQ9Y5K3 369 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PPV9 198 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 LGALS8O00214 317 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 CREBL2O60519 120 aaPredicted RBP13.16□□□□□ -0.3
SRP54-202ENST00000546080 LPLP06858 475 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 IFNGR1P15260 489 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 MAKP20794 623 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 NT5EP21589 574 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 ACTC1P68032 377 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 ACTA1P68133 377 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 FOXK2Q01167 660 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SRP54-202ENST00000546080 SFRP5Q5T4F7 317 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 FCRLBQ6BAA4 426 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 APOOLQ6UXV4 268 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 LRRTM4Q86VH4 590 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 OR9A2Q8NGT5 310 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 ADAMTS15Q8TE58 950 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 SIPA1Q96FS4 1042 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 ACTRT3Q9BYD9 372 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 TMPRSS13Q9BYE2 586 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
SRP54-202ENST00000546080 NOX3Q9HBY0 568 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 GPN1Q9HCN4 374 aaPredicted RBP13.16□□□□□ -0.3
SRP54-202ENST00000546080 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
SRP54-202ENST00000546080 CA5BQ9Y2D0 317 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
SRP54-202ENST00000546080 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 NUPL2O15504 423 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 ERI3O43414 337 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 VEGFDO43915 354 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 SUSD5O60279 629 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 KRT33AO76009 404 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 RCBTB2O95199 551 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 AIFM1O95831 613 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ADRB1P08588 477 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 CLUP10909 449 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 NOS3P29474 1203 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 S100A11P31949 105 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 MPIP34949 423 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 COL9A2Q14055 689 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 OR5M10Q6IEU7 315 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 FRRS1Q6ZNA5 592 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 AMZ2Q86W34 360 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 OR10Z1Q8NGY1 313 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 CMTM3Q96MX0 182 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 HRH3Q9Y5N1 445 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 SPINT1O43278 529 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ZNF749O43361 778 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 GALR3O60755 368 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 MTRF1O75570 445 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 GATBO75879 557 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 C6P13671 934 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 IL9P15248 144 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 METAP1P53582 386 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 MAZP56270 477 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms