RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ZIK1Q3SY52 487 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 C6orf52Q5T4I8 152 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ZNF468Q5VIY5 522 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ANKRD34AQ69YU3 496 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ZNF770Q6IQ21 691 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 TTC33Q6PID6 262 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ISLR2Q6UXK2 745 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 MBOAT2Q6ZWT7 520 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 CDK20Q8IZL9 346 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 RNF113BQ8IZP6 322 aaKnown RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 GPR119Q8TDV5 335 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 GTPBP3Q969Y2 492 aaKnown RBP12.56□□□□□ -0.4
SCARB1-209ENST00000545305 C3orf49Q96BT1 292 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 PRSS27Q9BQR3 290 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 DGCR6LQ9BY27 220 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ANGPTL4Q9BY76 406 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ANKRD10Q9NXR5 420 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 TMEM5Q9Y2B1 443 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 MED31Q9Y3C7 131 aa12.56□□□□□ -0.4
SCARB1-209ENST00000545305 ANKRD33BA6NCL7 494 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 H0YAE9 185 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 DLGAP1O14490 977 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 ADAM10O14672 748 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 MITFO75030 526 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-209ENST00000545305 SNX4O95219 450 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 GASTP01350 101 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 POU2F1P14859 743 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 GSTM3P21266 225 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 PLA2G5P39877 138 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 HTR3AP46098 478 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 TPD52P55327 224 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-209ENST00000545305 ALDH6A1Q02252 535 aaKnown RBP12.55□□□□□ -0.4
SCARB1-209ENST00000545305 KCNAB2Q13303 367 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 RAPSNQ13702 412 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 TUBA3CQ13748 450 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 CMPK2Q5EBM0 449 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 NHSL2Q5HYW2 709 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 TTC23Q5W5X9 447 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 OR5M10Q6IEU7 315 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 TUBA3EQ6PEY2 450 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 LINC00696Q6ZRV3 163 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 NRMQ8IXM6 262 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 PSD4Q8NDX1 1056 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 ST8SIA1Q92185 356 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 DTNBP1Q96EV8 351 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 NIPSNAP1Q9BPW8 284 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 DSN1Q9H410 356 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
SCARB1-209ENST00000545305 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 MED11Q9P086 117 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 LRFN1Q9P244 771 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 LRCH1Q9Y2L9 728 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 PCDHGB6Q9Y5F9 930 aa12.55□□□□□ -0.4
SCARB1-209ENST00000545305 A0A087WUJ7 227 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 C17orf51A8MQB3 221 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 KPNA4O00629 521 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-209ENST00000545305 GNB5O14775 395 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 SNPHO15079 494 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 EFSO43281 561 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 PIP5K1CO60331 668 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 PTNP21246 168 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 CXCR1P25024 350 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 TACR3P29371 465 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
SCARB1-209ENST00000545305 COX10Q12887 443 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 MFAP5Q13361 173 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 MED21Q13503 144 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 C1orf94Q6P1W5 598 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 WDR88Q6ZMY6 472 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 ATG4DQ86TL0 474 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-209ENST00000545305 PLCZ1Q86YW0 608 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 PARP8Q8N3A8 854 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 OR2M3Q8NG83 312 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 TMEM41AQ96HV5 264 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 FAM46AQ96IP4 442 aaKnown RBP12.54□□□□□ -0.4
SCARB1-209ENST00000545305 JSRP1Q96MG2 331 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-209ENST00000545305 FRMD6Q96NE9 622 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 MBOAT4Q96T53 435 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 GABARAPL3Q9BY60 117 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 CPAMD8Q8IZJ3 1885 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
SCARB1-209ENST00000545305 HTR3EA5X5Y0 456 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 G3V3Y1 287 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 RRP8O43159 456 aaKnown RBP12.53□□□□□ -0.4
SCARB1-209ENST00000545305 SLC25A12O75746 678 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 NTN1O95631 604 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 WDPCPO95876 746 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 IFI30P13284 250 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 FPR3P25089 353 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 MST1P26927 711 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 CD96P40200 585 aa12.53□□□□□ -0.4
SCARB1-209ENST00000545305 GPR4P46093 362 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms