RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 HOXB1P14653 301 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 NPR2P20594 1047 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 DDCP20711 480 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 IVDP26440 423 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 CXCR5P32302 372 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 GPR6P46095 362 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 LMO4P61968 165 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 FOXF1Q12946 379 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 TRADDQ15628 312 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ADRM1Q16186 407 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 MMEL1Q495T6 779 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ZNF362Q5T0B9 420 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 GRTP1Q5TC63 336 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 KLC3Q6P597 504 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 GALNT18Q6P9A2 607 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 THSD4Q6ZMP0 1018 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 RAPH1Q70E73 1250 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 DOK3Q7L591 496 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ADGRG3Q86Y34 549 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 TREML1Q86YW5 311 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 C1orf52Q8N6N3 182 aaKnown RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 CDRT4Q8N9R6 151 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ZNF527Q8NB42 609 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 IL17RDQ8NFM7 739 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 CEP70Q8NHQ1 597 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 PIGXQ8TBF5 258 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 GPR151Q8TDV0 419 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 SELENOMQ8WWX9 145 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SLC25A28Q96A46 364 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ZNF775Q96BV0 537 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 LRRC58Q96CX6 371 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ELP4Q96EB1 424 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ZHX1-C8orf76Q96EF9 292 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SLC38A2Q96QD8 506 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 DESI2Q9BSY9 194 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 C1QTNF6Q9BXI9 259 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SERINC1Q9NRX5 453 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SIRT5Q9NXA8 310 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 CRNNQ9UBG3 495 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 UPB1Q9UBR1 384 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ICAM5Q9UMF0 924 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 ARFGEF3Q5TH69 2177 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 IGHV3-15A0A0B4J1V0 119 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 GNG14A0A1W2PPG7 69 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 ZNF716A6NP11 495 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 E7ESA3 106 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 STX16-NPEPL1H3BU86 382 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 hCG_2039718K7EN88 272 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 SULT2B1O00204 365 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 STX16O14662 325 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 PRSS23O95084 383 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 NUDT14O95848 222 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 OTCP00480 354 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 AVPP01185 164 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 PDYNP01213 254 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 FSHBP01225 129 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 PRPS2P11908 318 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 PRKCAP17252 672 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 NTSP30990 170 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 ARL1P40616 181 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 PRIM2P49643 509 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 CLK1P49759 484 aaKnown RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 DIO1P49895 249 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 NCBP2P52298 156 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPA-207ENST00000545284 IL1RL1Q01638 556 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 ZNF117Q03924 483 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 DLG1Q12959 904 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 TRAF3Q13114 568 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 SPIN4Q56A73 249 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 HP1BP3Q5SSJ5 553 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 ANKRD16Q6P6B7 361 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 TMEM107Q6UX40 140 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 REC114Q7Z4M0 266 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 ABHD12BQ7Z5M8 362 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 FBXO36Q8NEA4 188 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 MAGEE2Q8TD90 523 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 GPR119Q8TDV5 335 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 RDH5Q92781 318 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 DVL3Q92997 716 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 RAB39BQ96DA2 213 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 SH3YL1Q96HL8 342 aaPredicted RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 CDK15Q96Q40 435 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 ZNF416Q9BWM5 594 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 PIF1Q9H611 641 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 DYNLRB1Q9NP97 96 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 GIN1Q9NXP7 522 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 TESQ9UGI8 421 aaKnown RBP6.3□□□□□ -1.4
COPA-207ENST00000545284 PPIAL4AQ9Y536 164 aa6.3□□□□□ -1.4
COPA-207ENST00000545284 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
COPA-207ENST00000545284 PPIAL4EA0A075B759 164 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 PPIAL4CA0A0B4J2A2 164 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 IGHV1-18A0A0C4DH31 117 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 A0A1W2PNR3 127 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 TMEM129A0AVI4 362 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 GXYLT2A0PJZ3 443 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 PPIAL4DF5H284 164 aa6.29□□□□□ -1.4
COPA-207ENST00000545284 PGRMC1O00264 195 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms