RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SIRPAP78324 504 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 SORDQ00796 357 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 MERTKQ12866 999 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 SNTB1Q13884 538 aaKnown RBP14.1□□□□□ -0.15
CCDC78-216ENST00000544996 RGNQ15493 299 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 LRIF1Q5T3J3 769 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 C3orf33Q6P1S2 294 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 FAM214BQ7L5A3 538 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 FAM222BQ8WU58 562 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 GMPPAQ96IJ6 420 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-216ENST00000544996 GLRX2Q9NS18 164 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 ACER3Q9NUN7 267 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 GALNT8Q9NY28 637 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 ZNF232Q9UNY5 417 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 EMC9Q9Y3B6 208 aa14.1□□□□□ -0.15
CCDC78-216ENST00000544996 ADGRG4Q8IZF6 3080 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 KIAA1549Q9HCM3 1950 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 A0A0G2JPF8 293 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CLDN24A6NM45 220 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 HNRNPCL2B2RXH8 293 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 HNRNPCL3B7ZW38 293 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 C5orf58C9J3I9 102 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ANGPT2O15123 496 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 HNRNPCL1O60812 293 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 BCAS1O75363 584 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 VIMP08670 466 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 HNRNPCL4P0DMR1 293 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 RPS4Y1P22090 263 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 SHC1P29353 583 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CPOXP36551 454 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 APOBEC1P41238 236 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CTBP2P56545 445 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 LARS2Q15031 903 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ZSWIM7Q19AV6 140 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 PAGE3Q5JUK9 113 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 VWA1Q6PCB0 445 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 BTLAQ7Z6A9 289 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ZZZ3Q8IYH5 903 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ZNF440Q8IYI8 595 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 OR52P1PQ8NH57 321 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 SLC25A43Q8WUT9 341 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CNOT9Q92600 299 aaKnown RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ZNF524Q96C55 264 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 LURAP1Q96LR2 239 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 SLC39A3Q9BRY0 314 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 ARMC7Q9H6L4 198 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 SLC52A3Q9NQ40 469 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 MRGBPQ9NV56 204 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CRIM1Q9NZV1 1036 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 PROCRQ9UNN8 238 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 NDUFAF1Q9Y375 327 aa14.09□□□□□ -0.15
CCDC78-216ENST00000544996 SPIN1Q9Y657 262 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-216ENST00000544996 CFAP73A6NFT4 308 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 EVPLLA8MZ36 301 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 CD8BP10966 210 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 HOXB9P17482 250 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 FKBP2P26885 142 aaKnown RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 HTR3AP46098 478 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 IDH2P48735 452 aaKnown RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 RNPS1Q15287 305 aaKnown RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 MAPK11Q15759 364 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 LIN52Q52LA3 116 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 MRPL2Q5T653 305 aaKnown RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 PRAMEF8Q5VWM4 474 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 PRAMEF7Q5VXH5 474 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 PLEKHM3Q6ZWE6 761 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 GRINAQ7Z429 371 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 TMEM200AQ86VY9 491 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 TMEM19Q96HH6 336 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 TMEM120AQ9BXJ8 343 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 A4GALTQ9NPC4 353 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 DNAJB12Q9NXW2 375 aaKnown RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 SLC25A37Q9NYZ2 338 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 SLAMF8Q9P0V8 285 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 LEF1Q9UJU2 399 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-216ENST00000544996 HCFC1P51610 2035 aa14.08□□□□□ -0.16
CCDC78-216ENST00000544996 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 ATP8B1O43520 1251 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 SS18L1O75177 396 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-216ENST00000544996 THBS1P07996 1170 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 BMP2P12643 396 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 KCNJ5P48544 419 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 PCYT1AP49585 367 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 RAC3P60763 192 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 GUCY1A3Q02108 690 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 GUSBP1Q15486 140 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 ZNF239Q16600 458 aaKnown RBP14.07□□□□□ -0.16
CCDC78-216ENST00000544996 GCNT6Q5T4J0 391 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 MSRB3Q8IXL7 192 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 OR6K3Q8NGY3 331 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 TSPEARQ8WU66 669 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 ROBO4Q8WZ75 1007 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 MAL2Q969L2 176 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 OR5B2Q96R09 309 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 CCDC106Q9BWC9 280 aa14.07□□□□□ -0.16
CCDC78-216ENST00000544996 OPN3Q9H1Y3 402 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms