RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	TMEM117	Q9H0C3	514 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	RHBG	Q9H310	441 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	ZDHHC11	Q9H8X9	412 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	SIGLEC8	Q9NYZ4	499 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	RPS6KB2	Q9UBS0	482 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	RASD1	Q9Y272	281 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	OR10H1	Q9Y4A9	318 aa		2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	COL16A1	Q07092	1604 aa	Predicted RBP	2.85	□□□□□ -1.95
RAP1B-231	ENST00000544639	NPIPA7	E9PJI5	369 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	PRKY	O43930	277 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	PEX11A	O75192	247 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	BCAS1	O75363	584 aa	Predicted RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	GNA14	O95837	355 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	NPIPA8	P0DM63	369 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	RNH1	P13489	461 aa	Known RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	MGMT	P16455	207 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	HOXD10	P28358	340 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	RBMX	P38159	391 aa	Known RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	PRKX	P51817	358 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	PLK1	P53350	603 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	RIPK4	P57078	832 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	CHRNB3	Q05901	458 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	CKAP4	Q07065	602 aa	Known RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	ELP6	Q0PNE2	266 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	MXD4	Q14582	209 aa	Predicted RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	KRTAP13-3	Q3SY46	172 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	SLC36A3	Q495N2	470 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	GGTA1P	Q4G0N0	100 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	ARC	Q7LC44	396 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	FAM220A	Q7Z4H9	259 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	NRM	Q8IXM6	262 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	SVOPL	Q8N434	492 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	TMEM252	Q8N6L7	170 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	OR1E3	Q8WZA6	343 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	KLHDC3	Q9BQ90	382 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	NXF5	Q9H1B4	397 aa	Known RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	ELOVL3	Q9HB03	270 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	NAP1L2	Q9ULW6	460 aa	Predicted RBP	2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	NPIPA1	Q9UND3	350 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	IFT52	Q9Y366	437 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	AP1M2	Q9Y6Q5	423 aa		2.84	□□□□□ -1.95
RAP1B-231	ENST00000544639	VSTM2B	A6NLU5	285 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	KIF2A	O00139	706 aa	Predicted RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ANGPT2	O15123	496 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	NOL3	O60936	208 aa	Known RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	HPN	P05981	417 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	TSPY4	P0CV99	314 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	TSPY10	P0CW01	314 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	HSPA5	P11021	654 aa	Known RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	HPD	P32754	393 aa	Predicted RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SOX6	P35712	828 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	LEP	P41159	167 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	HNRNPA3	P51991	378 aa	Known RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	HSPA2	P54652	639 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	TLE4	Q04727	773 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SELPLG	Q14242	412 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SYPL1	Q16563	259 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ARMCX2	Q7L311	632 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZDHHC21	Q8IVQ6	265 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	MTURN	Q8N3F0	131 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	STXBP6	Q8NFX7	210 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	OR52I1	Q8NGK6	324 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	OR2T34	Q8NGX1	318 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SYAP1	Q96A49	352 aa	Predicted RBP	2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ELSPBP1	Q96BH3	223 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ARHGDIG	Q99819	225 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	OMD	Q99983	421 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	EBF4	Q9BQW3	602 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SLC35A5	Q9BS91	424 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	MAGT1	Q9H0U3	335 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	RIBC2	Q9H4K1	309 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	SH2D2A	Q9NP31	389 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	NUDT15	Q9NV35	164 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	TMOD2	Q9NZR1	351 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639	ERVW-1	Q9UQF0	538 aa		2.83	□□□□□ -1.96
RAP1B-231	ENST00000544639		A0A0G2JRQ6	117 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639		A0A0J9YXY3	114 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639		E7ESA3	106 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	BTN3A3	O00478	584 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	XPO1	O14980	1071 aa	Known RBP	2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	TAPBP	O15533	448 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	RS1	O15537	224 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	TBX19	O60806	448 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	BBOX1	O75936	387 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	SUPT7L	O94864	414 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	GUCA1C	O95843	209 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	DES	P17661	470 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	UQCRC2	P22695	453 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	UGT1A5	P35504	534 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	RGS4	P49798	205 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	CCDC173	Q0VFZ6	552 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	SNTB2	Q13425	540 aa	Known RBP	2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	TPD52L1	Q16890	204 aa	Predicted RBP	2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	NADK2	Q4G0N4	442 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	CCDC137	Q6PK04	289 aa	Known RBP	2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	MOB3B	Q86TA1	216 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	VRK2	Q86Y07	508 aa		2.82	□□□□□ -1.96
RAP1B-231	ENST00000544639	LINC01555	Q8NAE3	123 aa		2.82	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms