RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ABCG2Q9UNQ0 655 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 OARD1Q9Y530 152 aa3.57□□□□□ -1.84
SNHG1-220ENST00000544550 A0A087WZY1 265 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ZCWPW2A0A1B0GU75 182 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 A0A1B0GUS0 222 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GOLGA6L10A6NI86 522 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SDR42E2A6NKP2 422 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF785A8K8V0 405 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 B9A039 149 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FOXE1O00358 373 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TIMM23O14925 209 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SCAMP2O15127 329 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ADAMDEC1O15204 470 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PIN1P1O15428 100 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CXCL13O43927 109 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 KERAO60938 352 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PRKRAO75569 313 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 BCAS2O75934 225 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 LYZL6O75951 148 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PDE5AO76074 875 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PGM3O95394 542 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PNPP00491 289 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TFP02787 698 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 YES1P07947 543 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 MSMBP08118 114 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 F7P08709 466 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CCDC175P0C221 793 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CT62P0C5K7 136 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FAM58BPP0C7Q3 252 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PCNAP12004 261 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 MLNP12872 115 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ETS1P14921 441 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ANPEPP15144 967 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PORP16435 677 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ME2P23368 584 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TNFSF4P23510 183 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 EVI2BP34910 448 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GDF5P43026 501 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 KHKP50053 298 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PPOXP50336 477 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PTTG1IPP53801 180 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GAS1P54826 345 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CDKN2DP55273 166 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 POU6F2P78424 691 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TIAL1Q01085 375 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 IRF8Q02556 426 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 BTKQ06187 659 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PDK4Q16654 411 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CDKL4Q5MAI5 379 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SH2D4BQ5SQS7 431 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 HBMQ6B0K9 141 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FAM45BPQ6NSW5 357 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 MFSD12Q6NUT3 480 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 AADACL2Q6P093 401 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 MED27Q6P2C8 311 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 B3GLCTQ6Y288 498 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SLC46A3Q7Z3Q1 461 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GALNT7Q86SF2 657 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GALNT10Q86SR1 603 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ADAMTSL2Q86TH1 951 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 GSPT2Q8IYD1 628 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 LAS2Q8IYD9 372 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SYCE1Q8N0S2 351 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SLC43A2Q8N370 569 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 BPIFB2Q8N4F0 458 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 NKAPQ8N5F7 415 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ZDHHC22Q8N966 263 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 OR51F2Q8NH61 342 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 OR2V1Q8NHB1 315 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FAM110BQ8TC76 370 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FAM45AQ8TCE6 357 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 RNF128Q8TEB7 428 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 WDR60Q8WVS4 1066 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 NEU4Q8WWR8 484 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TMBIM1Q969X1 311 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 FBXO17Q96EF6 278 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ADGRG7Q96K78 797 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 WWC2-AS2Q96NR7 200 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SNX18Q96RF0 628 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 NEU1Q99519 415 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 CHP1Q99653 195 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 ARPC5LQ9BPX5 153 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 TINAGL1Q9GZM7 467 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SAYSD1Q9NPB0 183 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SLC52A3Q9NQ40 469 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 IARS2Q9NSE4 1012 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 NPAP1Q9NZP6 1156 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 MRTO4Q9UKD2 239 aaKnown RBP3.56□□□□□ -1.84
SNHG1-220ENST00000544550 PLLPQ9Y342 182 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
SNHG1-220ENST00000544550 SCN3AQ9NY46 2000 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 NCKAP5O14513 1909 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 A0A087WWL8 130 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 IGLV3-32A0A0A0MS00 114 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 A0A0A6YYD5 115 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GLOD5A6NK44 160 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GJE1A6NN92 205 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GOLGA6L6A8MZA4 724 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF814B7Z6K7 855 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms