RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 PPCDCQ96CD2 204 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 METTL2AQ96IZ6 378 aaKnown RBP13.57□□□□□ -0.24
CD4-212ENST00000544344 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 C1QTNF6Q9BXI9 259 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 PLA2G12AQ9BZM1 189 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 PIGUQ9H490 435 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 RRAGDQ9NQL2 400 aaPredicted RBP13.57□□□□□ -0.24
CD4-212ENST00000544344 PTGDR2Q9Y5Y4 395 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 KCNE3Q9Y6H6 103 aa13.57□□□□□ -0.24
CD4-212ENST00000544344 DYSFO75923 2080 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 NDUFS8O00217 210 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 DNAJA2O60884 412 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 SEC22BO75396 215 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 ITGA5P08648 1049 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 SDC1P18827 310 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 DIO1P49895 249 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 SQLEQ14534 574 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
CD4-212ENST00000544344 PDK3Q15120 406 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 LCA5Q86VQ0 697 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 MEX3DQ86XN8 651 aaKnown RBP13.56□□□□□ -0.24
CD4-212ENST00000544344 CCNYL1Q8N7R7 359 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 OR5W2Q8NH69 310 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 FOXN4Q96NZ1 517 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 SORCS2Q96PQ0 1159 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 CCT7Q99832 543 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 HOXD1Q9GZZ0 328 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 QRSL1Q9H0R6 528 aaKnown RBP13.56□□□□□ -0.24
CD4-212ENST00000544344 SH3BP4Q9P0V3 963 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 MALT1Q9UDY8 824 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 EMCNQ9ULC0 261 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 TRAF6Q9Y4K3 522 aa13.56□□□□□ -0.24
CD4-212ENST00000544344 NUP214P35658 2090 aaPredicted RBP13.55□□□□□ -0.24
CD4-212ENST00000544344 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 G3V2L1 256 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 PDLIM1O00151 329 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
CD4-212ENST00000544344 ECHS1P30084 290 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 APOBEC3AP31941 199 aaPredicted RBP13.55□□□□□ -0.24
CD4-212ENST00000544344 PDLIM4P50479 330 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 ATP12AP54707 1039 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 CHRNB3Q05901 458 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 MLC1Q15049 377 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 CR1LQ2VPA4 569 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 TIGD2Q4W5G0 525 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 DCST2Q5T1A1 773 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 CDC73Q6P1J9 531 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 C3orf33Q6P1S2 294 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 TMPPEQ6ZT21 453 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 DEPDC4Q8N2C3 294 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 UBE2J2Q8N2K1 259 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 OR2T11Q8NH01 316 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 APH1AQ96BI3 265 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 TSSK3Q96PN8 268 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 IQCGQ9H095 443 aaKnown RBP13.55□□□□□ -0.24
CD4-212ENST00000544344 ZCCHC3Q9NUD5 404 aaKnown RBP13.55□□□□□ -0.24
CD4-212ENST00000544344 C1orf109Q9NX04 203 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 TAS2R16Q9NYV7 291 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 DTNAQ9Y4J8 743 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 ATP23Q9Y6H3 246 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 PMF1-BGLAPU3KQ54 211 aa13.55□□□□□ -0.24
CD4-212ENST00000544344 CCT8L1PA6NM43 557 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 H3BNH8 94 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 GTPBP1O00178 669 aaKnown RBP13.54□□□□□ -0.24
CD4-212ENST00000544344 ZNF264O43296 627 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 TGFAP01135 160 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 BMP4P12644 408 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 HNF1AP20823 631 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 ATP6V1C1P21283 382 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 CFPP27918 469 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 PHC1P78364 1004 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 C8orf74Q6P047 294 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 MTDHQ86UE4 582 aaKnown RBP13.54□□□□□ -0.24
CD4-212ENST00000544344 RFLNBQ8N5W9 214 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 RFWD2Q8NHY2 731 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 PIMREGQ9BSJ6 248 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 GPATCH2Q9NW75 528 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 EMC3Q9P0I2 261 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 KCNE5Q9UJ90 142 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 NOSIPQ9Y314 301 aaKnown RBP13.54□□□□□ -0.24
CD4-212ENST00000544344 MGAM2Q2M2H8 2515 aa13.54□□□□□ -0.24
CD4-212ENST00000544344 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
CD4-212ENST00000544344 ATP6V1G2-DDX39BF2Z307 99 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 TCF21O43680 179 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 KIAA0513O60268 411 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 EIF4E2O60573 245 aaKnown RBP13.53□□□□□ -0.24
CD4-212ENST00000544344 ZNF23P17027 643 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 ITGA2P17301 1181 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 SESN3P58005 492 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 SKP2Q13309 424 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
CD4-212ENST00000544344 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
CD4-212ENST00000544344 OR7E24Q6IFN5 339 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms