RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 OAZ1P54368 228 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 NDUFA6P56556 154 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PPP3R1P63098 170 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 B4GALNT1Q00973 533 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PRPSAP1Q14558 356 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 VMACQ2NL98 169 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TIFABQ6ZNK6 161 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 LRP11Q86VZ4 500 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 FAM3CQ92520 227 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SUSD3Q96L08 255 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 LRFN3Q9BTN0 628 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 C1orf198Q9H425 327 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 COL11A2P13942 1736 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 GLSO94925 669 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 HAPLN1P10915 354 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 BMP3P12645 472 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PRKCHP24723 683 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ITPKBP27987 946 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 MAS1LP35410 378 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 LIMS1P48059 325 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 NOVP48745 357 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 DNAJB13P59910 316 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 RBPJQ06330 500 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 MAD2L1Q13257 205 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PEA15Q15121 130 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 EXOC3L2Q2M3D2 409 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 C9orf50Q5SZB4 431 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ABHD17BQ5VST6 288 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 AGBL4Q5VU57 503 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 DNAJC24Q6P3W2 148 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TSSK4Q6SA08 328 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TMPPEQ6ZT21 453 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ABI3BPQ7Z7G0 1075 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 LINC00471Q8N535 108 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 CERS5Q8N5B7 392 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ARL14EPQ8N8R7 260 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 OR5K1Q8NHB7 308 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ASB9Q96DX5 294 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 MOCOSQ96EN8 888 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ITCHQ96J02 903 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 PKIBQ9C010 78 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 CIPCQ9C0C6 399 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM185BQ9H7F4 350 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 OR14J1Q9UGF5 321 aa8.29□□□□□ -1.08
VPS13D-212ENST00000543766 ELF5Q9UKW6 265 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-212ENST00000543766 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 GPR31O00270 319 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ECI2O75521 394 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TEAD1P28347 426 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 MPLP40238 635 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CASRP41180 1078 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 BLKP51451 505 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SORDQ00796 357 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 DAG1Q14118 895 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 BOP1Q14137 746 aaKnown RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF239Q16600 458 aaKnown RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 LIPMQ5VYY2 423 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 NAPRTQ6XQN6 538 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SHFQ7M4L6 423 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 RNF130Q86XS8 419 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CCDC117Q8IWD4 279 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SP8Q8IXZ3 490 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 OR51D1Q8NGF3 324 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 PINX1Q96BK5 328 aaKnown RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 KREMEN1Q96MU8 473 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM56Q96MV1 263 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SLC38A2Q96QD8 506 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 PRRT1Q99946 306 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 EMC7Q9NPA0 242 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 GTSE1Q9NYZ3 720 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SCP2D1Q9UJQ7 156 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 COLEC10Q9Y6Z7 277 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TCRBV7S3A2A0A539 114 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 H0Y980 276 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ITGB2P05107 769 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 IFNGR2P38484 337 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 LIPAP38571 399 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 NRIP1P48552 1158 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CTF1Q16619 201 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 MICAQ29983 383 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ISXQ2M1V0 245 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF773Q6PK81 442 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 BTNL3Q6UXE8 466 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 PEG10Q86TG7 708 aaKnown RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SLC26A11Q86WA9 606 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 MS4A15Q8N5U1 240 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TXNDC5Q8NBS9 432 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms