RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GAPDHSO14556 408 aaPredicted RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 SPNP16150 400 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 TPMTP51580 245 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ZNF440Q8IYI8 595 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ZNF619Q8N2I2 560 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ABHD4Q8TB40 342 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 OR7D2Q96RA2 312 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ARAP2Q8WZ64 1704 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 NPIPA5A0A0B4J1W7 369 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 A0A1B0GTL3 188 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 NPIPA7E9PJI5 369 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 NPIPA8P0DM63 369 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 IMPA1P29218 277 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 CHRNEQ04844 493 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 GPR176Q14439 515 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 UBE2NLQ5JXB2 153 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 TSSK4Q6SA08 328 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 CDS1Q92903 461 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 MMABQ96EY8 250 aaPredicted RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 MACROD1Q9BQ69 325 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ASB6Q9NWX5 421 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 SLC35A3Q9Y2D2 325 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 LCMT2O60294 686 aaKnown RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 SDC3O75056 442 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ETV1P50549 477 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 SHC2P98077 582 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 RBMS2Q15434 407 aaKnown RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ESX1Q8N693 406 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 SHDQ96IW2 340 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 UNKLQ9H9P5 680 aaKnown RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ACER3Q9NUN7 267 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 C2orf74A8MZ97 194 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 LATO43561 262 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 GPRIN2O60269 458 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 B3GALT4O96024 378 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 IFNA2P01563 188 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 MMP2P08253 660 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 S100A11P31949 105 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 KCNJ10P78508 379 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 ARHGAP40Q5TG30 622 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 GLB1L2Q8IW92 636 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 MRPL43Q8N983 215 aaKnown RBP18.11■□□□□ 0.49
SUDS3-204ENST00000543473 LGALS14Q8TCE9 139 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 PARPBPQ9NWS1 579 aa18.11■□□□□ 0.49
SUDS3-204ENST00000543473 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CLEC3AO75596 197 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 KCNJ5P48544 419 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 GAB1Q13480 694 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 DUSP7Q16829 419 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 MPP7Q5T2T1 576 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 HENMT1Q5T8I9 393 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 NXNL2Q5VZ03 156 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 PTCHD1Q96NR3 888 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 KLRF1Q9NZS2 232 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 TRABD2BA6NFA1 517 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 RFXAPO00287 272 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 PLGP00747 810 aaPredicted RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 C1QAP02745 245 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CSNK1DP48730 415 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CLDN12P56749 244 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 ARF3P61204 181 aaPredicted RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 ARF1P84077 181 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 IRF4Q15306 451 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 SLCO4C1Q6ZQN7 724 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 ADGRF3Q8IZF5 1079 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 OR5H2Q8NGV7 314 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 QRSL1Q9H0R6 528 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 IFNA17P01571 189 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 HYAL4Q2M3T9 481 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 TIGD3Q6B0B8 471 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 RPL22L1Q6P5R6 122 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 ZNF322Q6U7Q0 402 aaPredicted RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CCDC54Q8NEL0 328 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 MYLIPQ8WY64 445 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 SLC46A2Q9BY10 475 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CPEB1Q9BZB8 566 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 A0A0D9SG52 128 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 TOR1AO14656 332 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 RNH1P13489 461 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 XCR1P46094 333 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 RPL34P49207 117 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 LTBQ06643 244 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 PUS10Q3MIT2 529 aaKnown RBP18.1■□□□□ 0.49
SUDS3-204ENST00000543473 ALG10Q5BKT4 473 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 CSNK1A1LQ8N752 337 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 OR1A2Q9Y585 309 aa18.1■□□□□ 0.49
SUDS3-204ENST00000543473 TRA2BP62995 288 aaKnown RBP18.09■□□□□ 0.49
SUDS3-204ENST00000543473 TEKQ02763 1124 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 SYT14P1Q58G82 188 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 SLC6A19Q695T7 634 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 TMEM234Q8WY98 164 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 ISG20Q96AZ6 181 aaKnown RBP18.09■□□□□ 0.49
SUDS3-204ENST00000543473 CCDC86Q9H6F5 360 aaKnown RBP18.09■□□□□ 0.49
SUDS3-204ENST00000543473 CAMK2AQ9UQM7 478 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 ACOD1A6NK06 481 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 TXNL1O43396 289 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 AKR7A2O43488 359 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 BAK1Q16611 211 aa18.09■□□□□ 0.49
SUDS3-204ENST00000543473 MCEMP1Q8IX19 187 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms