RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CLDN1O95832 211 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 FAM107AO95990 144 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 UQCRBP14927 111 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 GZMMP51124 257 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 SUCLG1P53597 346 aaKnown RBP16.56■□□□□ 0.24
COPS7A-216ENST00000543170 CLDN20P56880 219 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
COPS7A-216ENST00000543170 SESN3P58005 492 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 EPS8Q12929 822 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 HSPB2Q16082 182 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 CTU2Q2VPK5 515 aaKnown RBP16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF311Q5JNZ3 666 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 C3orf33Q6P1S2 294 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ESPNLQ6ZVH7 1005 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 CHMP1BQ7LBR1 199 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ZZZ3Q8IYH5 903 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 UBQLNLQ8IYU4 475 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ANKS4BQ8N8V4 417 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 BHLHE22Q8NFJ8 381 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-216ENST00000543170 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 WNT2BQ93097 391 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF524Q96C55 264 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF607Q96SK3 696 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 TM9SF2Q99805 663 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ASH1LQ9NR48 2969 aaKnown RBP16.56■□□□□ 0.24
COPS7A-216ENST00000543170 A0A0G2JNJ9 132 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 PRORSD1PA6NEY8 169 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 CFAP73A6NFT4 308 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 GJE1A6NN92 205 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 KDM4EB2RXH2 506 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-216ENST00000543170 ADAMDEC1O15204 470 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 DCTN3O75935 186 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 TOXO94900 526 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 IL2RAP01589 272 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 PCGF2P35227 344 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 RABL3Q5HYI8 236 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 FAM91A1Q658Y4 838 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 DHRS4L2Q6PKH6 230 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 PLEKHM3Q6ZWE6 761 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF550Q7Z398 422 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 GRINAQ7Z429 371 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 CALHM3Q86XJ0 350 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 OR10Q1Q8NGQ4 319 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF563Q8TA94 476 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 SMPDL3BQ92485 455 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 KLHL15Q96M94 604 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 CCT8L2Q96SF2 557 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 Q9UFV3 132 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 AP3M1Q9Y2T2 418 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF175Q9Y473 711 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 CHST2Q9Y4C5 530 aa16.55■□□□□ 0.24
COPS7A-216ENST00000543170 H0YC42 278 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 SERPINB7O75635 380 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 APOBEC1P41238 236 aaKnown RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 HTR3AP46098 478 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 VMACQ2NL98 169 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 PDSS1Q5T2R2 415 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 INTS11Q5TA45 600 aaKnown RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 ERICH5Q6P6B1 374 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 LILRA2Q8N149 483 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 C9orf106Q8NAJ2 232 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 TNIP2Q8NFZ5 429 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 LILRB4Q8NHJ6 448 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 CA5BP1Q8WTZ4 195 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 SLC25A43Q8WUT9 341 aaPredicted RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 REXO5Q96IC2 774 aaKnown RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 ECSITQ9BQ95 431 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 GPATCH1Q9BRR8 931 aaKnown RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 EVA1AQ9H8M9 152 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 EFCAB1Q9HAE3 211 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 RLIMQ9NVW2 624 aa16.54■□□□□ 0.24
COPS7A-216ENST00000543170 PLEKHB1Q9UF11 243 aaPredicted RBP16.54■□□□□ 0.24
COPS7A-216ENST00000543170 SLC22A20A6NK97 555 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 EIF1AYO14602 144 aaKnown RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 AP3D1O14617 1153 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 EFNA2O43921 213 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 RCBTB2O95199 551 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 FCGR2AP12318 317 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 GP1BBP13224 206 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 IL11P20809 199 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 RYKP34925 604 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 MERTKQ12866 999 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 GKAP1Q5VSY0 366 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 C8orf82Q6P1X6 216 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 MED12LQ86YW9 2145 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 CLIP4Q8N3C7 705 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 NAXEQ8NCW5 288 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 OR2V1Q8NHB1 315 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 LRRC37BQ96QE4 947 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 HOPXQ9BPY8 73 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 PINK1Q9BXM7 581 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 TMEM185BQ9H7F4 350 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 SERINC1Q9NRX5 453 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF629Q9UEG4 869 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 ADAM21Q9UKJ8 722 aa16.53■□□□□ 0.24
COPS7A-216ENST00000543170 SPIN1Q9Y657 262 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-216ENST00000543170 INTS1Q8N201 2190 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms