RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 OR4K3Q96R72 315 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 TAAR6Q96RI8 345 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 SERINC2Q96SA4 455 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 CYTH2Q99418 400 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 TEX12Q9BXU0 123 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 ATG10Q9H0Y0 220 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 MRPL15Q9P015 296 aaKnown RBP7.38□□□□□ -1.23
MRPS35-204ENST00000542199 SLC22A7Q9Y694 548 aa7.38□□□□□ -1.23
MRPS35-204ENST00000542199 SGK494L7N484 410 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 PPP1R3DO95685 299 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 WDPCPO95876 746 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 STSP08842 583 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 HIST1H2AGP0C0S8 130 aaPredicted RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SLC35G6P0C7Q6 338 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 MYOD1P15172 320 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ITGA2P17301 1181 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 IL1RNP18510 177 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ELK3P41970 407 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 XCR1P46094 333 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 CCR8P51685 355 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 TDGF1P3P51864 188 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ISL1P61371 349 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SNTA1Q13424 505 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 HERC3Q15034 1050 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 PPP1R3AQ16821 1122 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 DUPD1Q68J44 220 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 LANCL3Q6ZV70 420 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 CPEB2Q7Z5Q1 589 aaKnown RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ASPGQ86U10 573 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SLC26A11Q86WA9 606 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 CEP97Q8IW35 865 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ZNF441Q8N8Z8 693 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 OR51Q1Q8NH59 317 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 UTP15Q8TED0 518 aaKnown RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SLC13A3Q8WWT9 602 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 METTL21AQ8WXB1 218 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 MOAP1Q96BY2 351 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 LRRC39Q96DD0 335 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SNF8Q96H20 258 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 PDLIM5Q96HC4 596 aaKnown RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 OLFM1Q99784 485 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 ANKHQ9HCJ1 492 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 OLAHQ9NV23 265 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 IKZF3Q9UKT9 509 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 AMDHD2Q9Y303 409 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 TEX264Q9Y6I9 313 aa7.37□□□□□ -1.23
MRPS35-204ENST00000542199 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.37□□□□□ -1.23
MRPS35-204ENST00000542199 MYO7BQ6PIF6 2116 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 IGHV3-20A0A0C4DH32 117 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 A0A0G2JPF8 293 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 A0A1W2PP11 408 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 TRBC2A0A5B9 178 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 OR5H15A6NDH6 313 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 HNRNPCL3B7ZW38 293 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 NDUFS4O43181 175 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 LRRTM2O43300 516 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 PLOD3O60568 738 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 GALR3O60755 368 aaPredicted RBP7.36□□□□□ -1.23
MRPS35-204ENST00000542199 RDH16O75452 317 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 RSL1D1O76021 490 aaKnown RBP7.36□□□□□ -1.23
MRPS35-204ENST00000542199 HNRNPCL4P0DMR1 293 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 IL10P22301 178 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 DR1Q01658 176 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 RELQ04864 619 aaPredicted RBP7.36□□□□□ -1.23
MRPS35-204ENST00000542199 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 FAM45BPQ6NSW5 357 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 H3F3CQ6NXT2 135 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 SBSNQ6UWP8 590 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 TMEM207Q6UWW9 146 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 GFRALQ6UXV0 394 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 ANKRD37Q7Z713 158 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 GPATCH11Q8N954 259 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 ZNF740Q8NDX6 193 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 PLPP5Q8NEB5 264 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 NT5CQ8TCD5 201 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 FAM45AQ8TCE6 357 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 ATL1Q8WXF7 558 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 ANKRD7Q92527 254 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 NR4A3Q92570 626 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 PYCR2Q96C36 320 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 MOCOSQ96EN8 888 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 CFAP36Q96G28 342 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 MARK4Q96L34 752 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 RUNDC3BQ96NL0 473 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 QRFPRQ96P65 431 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 GRPEL1Q9HAV7 217 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 PPANQ9NQ55 473 aaKnown RBP7.36□□□□□ -1.23
MRPS35-204ENST00000542199 GIMAP4Q9NUV9 329 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 C19orf25Q9UFG5 118 aaPredicted RBP7.36□□□□□ -1.23
MRPS35-204ENST00000542199 TEKT2Q9UIF3 430 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 CHMP2BQ9UQN3 213 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 NAALAD2Q9Y3Q0 740 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 HIVEP1P15822 2718 aa7.36□□□□□ -1.23
MRPS35-204ENST00000542199 CTAGE15A4D2H0 777 aa7.35□□□□□ -1.23
MRPS35-204ENST00000542199 ZNF860A6NHJ4 632 aa7.35□□□□□ -1.23
MRPS35-204ENST00000542199 USP27XA6NNY8 438 aa7.35□□□□□ -1.23
MRPS35-204ENST00000542199 MAGEB17A8MXT2 336 aa7.35□□□□□ -1.23
MRPS35-204ENST00000542199 E7ESA3 106 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms