RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CORO2BQ9UQ03 480 aa11.77□□□□□ -0.53
LTBR-208ENST00000541005 POLQO75417 2590 aa11.77□□□□□ -0.53
LTBR-208ENST00000541005 FBN2P35556 2912 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 A0A0J9YW62 118 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 CLDN24A6NM45 220 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 TNFSF11O14788 317 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 BCHEP06276 602 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 THBS1P07996 1170 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 SNRPB2P08579 225 aaKnown RBP11.76□□□□□ -0.53
LTBR-208ENST00000541005 SHC1P29353 583 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 SSTR2P30874 369 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 EIF1AXP47813 144 aaKnown RBP11.76□□□□□ -0.53
LTBR-208ENST00000541005 PCYT1AP49585 367 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 SESN3P58005 492 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 ZSWIM7Q19AV6 140 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 P4HA3Q7Z4N8 544 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 GCNT2Q8N0V5 402 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 TMEM19Q96HH6 336 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 ZNF317Q96PQ6 595 aaPredicted RBP11.76□□□□□ -0.53
LTBR-208ENST00000541005 CPPED1Q9BRF8 314 aaPredicted RBP11.76□□□□□ -0.53
LTBR-208ENST00000541005 TMEM185BQ9H7F4 350 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 COQ10BQ9H8M1 238 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 PACSIN3Q9UKS6 424 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 PRR14LQ5THK1 2151 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 MYO9AB2RTY4 2548 aa11.76□□□□□ -0.53
LTBR-208ENST00000541005 A0A0G2JPF8 293 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 CDHR4A6H8M9 788 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 TMEM247A6NEH6 219 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 HNRNPCL2B2RXH8 293 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 HNRNPCL3B7ZW38 293 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 ADAM11O75078 769 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 CYP7B1O75881 506 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 AQP8O94778 261 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 NUDT7P0C024 238 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 HNRNPCL4P0DMR1 293 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 IL7RP16871 459 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 GPX2P18283 190 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 KIR2DL2P43627 348 aaPredicted RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 ARFIP2P53365 341 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 SORDQ00796 357 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 SGCBQ16585 318 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 LIN52Q52LA3 116 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 PDSS1Q5T2R2 415 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 MRPL2Q5T653 305 aaKnown RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 HBMQ6B0K9 141 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 C3orf33Q6P1S2 294 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 PLEKHM3Q6ZWE6 761 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 HMGN2P46Q86SG4 172 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 RETREG3Q86VR2 466 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 ZNF440Q8IYI8 595 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 SLC25A43Q8WUT9 341 aaPredicted RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 CNOT9Q92600 299 aaKnown RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 CCDC106Q9BWC9 280 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 IKZF5Q9H5V7 419 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 KLHL14Q9P2G3 628 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 MCTS1Q9ULC4 181 aaKnown RBP11.75□□□□□ -0.53
LTBR-208ENST00000541005 NDUFAF1Q9Y375 327 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 LRBAP50851 2863 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 CCDC168Q8NDH2 2452 aa11.75□□□□□ -0.53
LTBR-208ENST00000541005 A8MXE2 369 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 EEF1E1-BLOC1S5C9J1V9 151 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 MSTNO14793 375 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 ANGPT2O15123 496 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 EEF1E1O43324 174 aaKnown RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 CXCL13O43927 109 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 ARAFP10398 606 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 ETS2P15036 469 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 SFTPDP35247 375 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 COQ5Q5HYK3 327 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 RPS26P11Q5JNZ5 115 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 GCNT6Q5T4J0 391 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 ZNF836Q6ZNA1 936 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 DHDDSQ86SQ9 333 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 C10orf111Q8N326 155 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 OR52P1PQ8NH57 321 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 BBS10Q8TAM1 723 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 RNF128Q8TEB7 428 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 MAL2Q969L2 176 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 SLC35B4Q969S0 331 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 CPNE4Q96A23 557 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 GMPPAQ96IJ6 420 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 TMEM38AQ9H6F2 299 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 TIGARQ9NQ88 270 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 SAR1AQ9NR31 198 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 GLRX2Q9NS18 164 aa11.74□□□□□ -0.53
LTBR-208ENST00000541005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 ZNF443Q9Y2A4 671 aaPredicted RBP11.74□□□□□ -0.53
LTBR-208ENST00000541005 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 EVPLLA8MZ36 301 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SLC22A2O15244 555 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SYNGR4O95473 234 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms