RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 GCM2O75603 506 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 PNMTP11086 282 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 PRKCAP17252 672 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 ITGA2P17301 1181 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 RYKP34925 604 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 POLR2HP52434 150 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 FOXK1P85037 733 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 NRF1Q16656 503 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 DUSP7Q16829 419 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 TMEM44Q2T9K0 475 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 WIPI1Q5MNZ9 446 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 C3orf33Q6P1S2 294 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 MTFR2Q6P444 385 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 Q6ZPB1 254 aaPredicted RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 CHMP1BQ7LBR1 199 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 YRDCQ86U90 279 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 DHFR2Q86XF0 187 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 GEMIN6Q8WXD5 167 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 LRGUKQ96M69 825 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 ARHGDIGQ99819 225 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 LRMDAQ9H2I8 198 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 TIGARQ9NQ88 270 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 DCAF13Q9NV06 445 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 RLIMQ9NVW2 624 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 ZNF835Q9Y2P0 537 aa15.86■□□□□ 0.13
CLSTN3-210ENST00000540931 A0A1B0GTH9 108 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 OR2M5A3KFT3 312 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 CLDN24A6NM45 220 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 SLC19A2O60779 497 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 TCN1P20061 433 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 POU3F2P20265 443 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 CD247P20963 164 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 IDH2P48735 452 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 SESN3P58005 492 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 CEACAM7Q14002 265 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 PRR30Q53SZ7 412 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 ZNF613Q6PF04 617 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 ULK3Q6PHR2 472 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 ARSKQ6UWY0 536 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 ESPNLQ6ZVH7 1005 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 FKBP9P1Q75LS8 142 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 RNF148Q8N7C7 305 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 SMYD1Q8NB12 490 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 PRDM14Q9GZV8 571 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 PCDHAC1Q9H158 963 aa15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 TSPAN10Q9H1Z9 355 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 TP63Q9H3D4 680 aaPredicted RBP15.85■□□□□ 0.13
CLSTN3-210ENST00000540931 A0A1B0GUH1 482 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 GSC2O15499 205 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 ZNF208O43345 1280 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 NTN1O95631 604 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 ZNF682O95780 498 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 SERPINA1P01009 418 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 IFNW1P05000 195 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 THRBP10828 461 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 BMP7P18075 431 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 CXCR1P25024 350 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 ACAA2P42765 397 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 CRYZQ08257 329 aaKnown RBP15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 MERTKQ12866 999 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 IFI44LQ53G44 452 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 TMEM211Q6ICI0 200 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 CYP4Z1Q86W10 505 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 C10orf67Q8IYJ2 551 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 ZPLD1Q8TCW7 415 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 DDIT4LQ96D03 193 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 SLC47A1Q96FL8 570 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 TPD52L3Q96J77 140 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 TIMP4Q99727 224 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 UGT2B28Q9BY64 529 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 ADAM19Q9H013 955 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 SLC6A15Q9H2J7 730 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 CHRNA9Q9UGM1 479 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 EGFL7Q9UHF1 273 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 RPH3AQ9Y2J0 694 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 SH3GLB1Q9Y371 365 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 USP9YO00507 2555 aaPredicted RBP15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 RELNP78509 3460 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 TEX15Q9BXT5 2789 aa15.84■□□□□ 0.13
CLSTN3-210ENST00000540931 HTR3EA5X5Y0 456 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 ARPC2O15144 300 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 TPST1O60507 370 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 OPN1SWP03999 348 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 CELA3AP09093 270 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 UMPSP11172 480 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 LCN8Q6JVE9 175 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 PGM2L1Q6PCE3 622 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 PLEKHM3Q6ZWE6 761 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 MPP4Q96JB8 637 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 FAM32AQ9Y421 112 aaKnown RBP15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 CHST2Q9Y4C5 530 aa15.83■□□□□ 0.12
CLSTN3-210ENST00000540931 CLEC18AA5D8T8 446 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 AQP12BA6NM10 295 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 NPIPA2E9PIF3 369 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 NPIPA3F8WFD2 350 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 OIP5O43482 229 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 DNPH1O43598 174 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 GMFGO60234 142 aa15.82■□□□□ 0.12
CLSTN3-210ENST00000540931 TPOP07202 933 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms