RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 MITFO75030 526 aaPredicted RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 UGT2B17O75795 530 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 FADS2O95864 444 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 IGKV3-11P04433 115 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 YES1P07947 543 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ELAVL4P26378 380 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 SSTR4P31391 388 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 UGT2B15P54855 530 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 SMIM11AP58511 58 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 LSM3P62310 102 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 TARDBPQ13148 414 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-213ENST00000539332 ELAVL1Q15717 326 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 GFOD2Q3B7J2 385 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 EIPR1Q53HC9 387 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ZNF311Q5JNZ3 666 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ATAD3CQ5T2N8 411 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 CCNJQ5T5M9 372 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 MFSD4BQ5TF39 518 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 SIGIRRQ6IA17 410 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 MZT2BQ6NZ67 158 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 NPSR1Q6W5P4 371 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 GDPD3Q7L5L3 318 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 TMPRSS12Q86WS5 348 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 VRK2Q86Y07 508 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 RBM45Q8IUH3 476 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 SLC5A8Q8N695 610 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ZSCAN1Q8NBB4 408 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 OR10G2Q8NGC3 310 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 OR6T1Q8NGN1 323 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 OR52P1PQ8NH57 321 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 C16orf52Q8NHV5 167 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 WDR36Q8NI36 951 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 DOK4Q8TEW6 326 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 PTPMT1Q8WUK0 201 aaPredicted RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 OIT3Q8WWZ8 545 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 LRFN5Q96NI6 719 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 TAAR9Q96RI9 348 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 SIGLEC11Q96RL6 698 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 FEVQ99581 238 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ZPBPQ9BS86 351 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 DDA1Q9BW61 102 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 GON7Q9BXV9 100 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 QRSL1Q9H0R6 528 aaKnown RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 EVA1AQ9H8M9 152 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 TRIM45Q9H8W5 580 aaPredicted RBP8.16□□□□□ -1.1
DDB1-213ENST00000539332 KRT84Q9NSB2 600 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 MAN2C1Q9NTJ4 1040 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 ERVK-19Q9WJR5 959 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 CFL2Q9Y281 166 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 DTX4Q9Y2E6 619 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 POFUT2Q9Y2G5 429 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 PCDHGB6Q9Y5F9 930 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 CELSR3Q9NYQ7 3312 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 A0A075B6Q4 140 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 CENPVL1A0A0U1RR11 272 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 HMX3A6NHT5 357 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 FAAHO00519 579 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 PCDH17O14917 1159 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 TPST2O60704 377 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 DDAH2O95865 285 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 DBIP07108 87 aaKnown RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 KLK3P07288 261 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 H1F0P07305 194 aaKnown RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 CT45A8P0DMV1 189 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 CT45A9P0DMV2 189 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 NID1P14543 1247 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 GABRA3P34903 492 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 SLC15A1P46059 708 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 SLC37A1P57057 533 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 PLAURQ03405 335 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 ZNF267Q14586 743 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 GANABQ14697 944 aaKnown RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 ZNHIT3Q15649 155 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 MAPK14Q16539 360 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 MINDY4Q4G0A6 757 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 CT45A2Q5DJT8 189 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 C3orf38Q5JPI3 329 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 FAM209AQ5JX71 171 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 LCN10Q6JVE6 187 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 ZNF517Q6ZMY9 492 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 ZNF836Q6ZNA1 936 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 C1orf122Q6ZSJ8 110 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 OVCH1Q7RTY7 1134 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 LAPTM4BQ86VI4 370 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 RAB43Q86YS6 212 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 ATG16L2Q8NAA4 619 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 VANGL1Q8TAA9 524 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 C9orf43Q8TAL5 461 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 STT3BQ8TCJ2 826 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 GPR151Q8TDV0 419 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 DIO2Q92813 273 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 TSLPQ969D9 159 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 PTCHD1Q96NR3 888 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 TRAF4Q9BUZ4 470 aaPredicted RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 POLR2J2Q9GZM3 115 aaKnown RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 VN1R1Q9GZP7 353 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 POLR2J3Q9H1A7 115 aaKnown RBP8.15□□□□□ -1.1
DDB1-213ENST00000539332 OR10A5Q9H207 317 aa8.15□□□□□ -1.1
DDB1-213ENST00000539332 RIBC2Q9H4K1 309 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms