RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 APTXQ7Z2E3 356 aaKnown RBP2.39□□□□□ -2.03
CCDC7-209ENST00000539197 TMEM17Q86X19 198 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 SLC22A8Q8TCC7 542 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 AENQ8WTP8 325 aaKnown RBP2.39□□□□□ -2.03
CCDC7-209ENST00000539197 FAM151AQ8WW52 585 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF578Q96N58 590 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-209ENST00000539197 CYP2S1Q96SQ9 504 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 MCHR1Q99705 422 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 DUSP16Q9BY84 665 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 NUFIP1Q9UHK0 495 aaKnown RBP2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ERVW-1Q9UQF0 538 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 USP16Q9Y5T5 823 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 SPACA6W5XKT8 324 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 UBE4BO95155 1302 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 TRIM64A6NGJ6 449 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 TRIM64BA6NI03 449 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF705EA8MWA4 302 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 H3BMQ9 156 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 SULT2B1O00204 365 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 DUX1O43812 170 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 HCN1O60741 890 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 LALBAP00709 142 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 RNH1P13489 461 aaKnown RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ETS1P14921 441 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 IGFBP3P17936 291 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 COX7A1P24310 79 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 CYLC1P35663 651 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 MAGEA5P43359 124 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 MAP2K1Q02750 393 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 CCDC173Q0VFZ6 552 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ATXN7L3Q14CW9 347 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 CHI3L2Q15782 390 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 CCDC184Q52MB2 194 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 Q5W150 140 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 FAHD2BQ6P2I3 314 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ARMCX2Q7L311 632 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ANKRD37Q7Z713 158 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 BCORP1Q8N888 145 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 MINDY2Q8NBR6 621 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 M1APQ8TC57 530 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 MGARPQ8TDB4 240 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 C14orf79Q96F83 325 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 FAHD2AQ96GK7 314 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 VPS35Q96QK1 796 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 SPXQ9BT56 116 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 GSDMCQ9BYG8 508 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF385DQ9H6B1 395 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 SLC25A22Q9H936 323 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 ACTR8Q9H981 624 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 VAT1LQ9HCJ6 419 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 SPASTQ9UBP0 616 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 FOXJ3Q9UPW0 622 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 OARD1Q9Y530 152 aa2.38□□□□□ -2.03
CCDC7-209ENST00000539197 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-209ENST00000539197 AIREO43918 545 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ECI2O75521 394 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 SLITRK3O94933 977 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ADRB3P13945 408 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 KIF5BP33176 963 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ATXN3P54252 364 aaPredicted RBP2.37□□□□□ -2.03
CCDC7-209ENST00000539197 PRPS1P60891 318 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 LAGE3Q14657 143 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 SF3A2Q15428 464 aaKnown RBP2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ACSM5Q6NUN0 579 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 CENPUQ71F23 418 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 MISPQ8IVT2 679 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 FAM9BQ8IZU0 186 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF713Q8N859 430 aaPredicted RBP2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF615Q8N8J6 731 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 OR2L8Q8NGY9 312 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 RNF185Q96GF1 192 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 AKR1E2Q96JD6 320 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 RNF126Q9BV68 326 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 ASF1AQ9Y294 204 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 KNSTRNQ9Y448 316 aa2.37□□□□□ -2.03
CCDC7-209ENST00000539197 RNF103-CHMP3A0A140T963 221 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 A0A1B0GWB2 263 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 PP2D1A8MPX8 630 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 RASGRF2O14827 1237 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 JAK2O60674 1132 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 UGT2B17O75795 530 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 TGFAP01135 160 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 PAICSP22234 425 aaKnown RBP2.36□□□□□ -2.03
CCDC7-209ENST00000539197 ASMTP46597 345 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 SH3BGRP55822 239 aaPredicted RBP2.36□□□□□ -2.03
CCDC7-209ENST00000539197 RIPPLY1Q0D2K3 151 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 PPP2R5CQ13362 524 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 MAPK6Q16659 721 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 C1orf146Q5VVC0 180 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
CCDC7-209ENST00000539197 C16orf62Q7Z3J2 963 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 C15orf54Q8N8G6 183 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms