RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 Q6ZT83 130 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
VAMP1-206ENST00000538970 CLECL1Q8IZS7 167 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 KBTBD8Q8NFY9 601 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 NEUROG1Q92886 237 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
VAMP1-206ENST00000538970 ZNF350Q9GZX5 532 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 PRSS50Q9UI38 385 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 CUBNO60494 3623 aa11.09□□□□□ -0.63
VAMP1-206ENST00000538970 HEATR5AQ86XA9 2040 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 RNF103-CHMP3A0A140T963 221 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 DUXAA6NLW8 204 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 TYROBPO43914 113 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 CYTIPO60759 359 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 STX11O75558 287 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 UGT2B17O75795 530 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 LYZL6O75951 148 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 CREB1P16220 341 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 EDNRAP25101 427 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 ETV4P43268 484 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 EMX2Q04743 252 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 IFFO1Q0D2I5 559 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 MAD2L1Q13257 205 aaPredicted RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 GPR68Q15743 365 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 ETFDHQ16134 617 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 PGS1Q32NB8 556 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 ARHGAP11BQ3KRB8 267 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 ABLIM2Q6H8Q1 611 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 OLIG3Q7RTU3 272 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 C6orf120Q7Z4R8 191 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 CLEC4FQ8N1N0 589 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 PIWIL2Q8TC59 973 aaKnown RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 SMAP2Q8WU79 429 aaPredicted RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 SLC35G5Q96KT7 338 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 OR5B2Q96R09 309 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF300Q96RE9 604 aaPredicted RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 THUMPD3Q9BV44 507 aaKnown RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 LAT2Q9GZY6 243 aa11.08□□□□□ -0.64
VAMP1-206ENST00000538970 QRSL1Q9H0R6 528 aaKnown RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 NOP53Q9NZM5 478 aaKnown RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 MAGED1Q9Y5V3 778 aaPredicted RBP11.08□□□□□ -0.64
VAMP1-206ENST00000538970 DPRXA6NFQ7 191 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF724A8MTY0 619 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 RNASET2O00584 256 aaKnown RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 KIAA0513O60268 411 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 CYP7B1O75881 506 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 CSTAP01040 98 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 FESP07332 822 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 UBTFL6P0CB48 400 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 COX5AP20674 150 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 MATN1P21941 496 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 CDKN1AP38936 164 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 DIO1P49895 249 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 SESN3P58005 492 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 VSNL1P62760 191 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 VEZF1Q14119 521 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 SMU1Q2TAY7 513 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 PGGHGQ32M88 737 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 DNAJC14Q6Y2X3 702 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 FAM71CQ8NEG0 241 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 MIPOL1Q8TD10 442 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ZNF75CPQ92670 426 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 TRMT61AQ96FX7 289 aaKnown RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ROPN1BQ9BZX4 212 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 TRIM2Q9C040 744 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 ROPN1Q9HAT0 212 aaPredicted RBP11.07□□□□□ -0.64
VAMP1-206ENST00000538970 MKLN1Q9UL63 735 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 LIPT1Q9Y234 373 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 USF3Q68DE3 2245 aa11.07□□□□□ -0.64
VAMP1-206ENST00000538970 A0A1W2PP18 115 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 RNF212BA8MTL3 300 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 C9JVG2 144 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 SCN2BO60939 215 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 THBS1P07996 1170 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 GUSBP08236 651 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 PGCP20142 388 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 IGHV1-2P23083 117 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 PGM1P36871 562 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 CASP9P55211 416 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 MERTKQ12866 999 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 PPA1Q15181 289 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 STK11Q15831 433 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 PDCD2Q16342 344 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-206ENST00000538970 MAPK14Q16539 360 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 SYT14P1Q58G82 188 aa11.06□□□□□ -0.64
VAMP1-206ENST00000538970 TYW3Q6IPR3 259 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms