RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TMEM5Q9Y2B1 443 aa13.46□□□□□ -0.25
CDCA3-207ENST00000538862 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 SCO2O43819 266 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 AK1P00568 194 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 ATP1B1P05026 303 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 MAKP20794 623 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TBXA2RP21731 343 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 ALAS2P22557 587 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 DHPSP49366 369 aaPredicted RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CLDN20P56880 219 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CLDN2P57739 230 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 INSL4Q14641 139 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 MAPK14Q16539 360 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TRMT12Q53H54 448 aaKnown RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 MRPL2Q5T653 305 aaKnown RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 HBMQ6B0K9 141 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 ENPP7Q6UWV6 458 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 ABHD13Q7L211 337 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 UBE2J2Q8N2K1 259 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CDRT4Q8N9R6 151 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 ZCCHC10Q8TBK6 192 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 UBASH3BQ8TF42 649 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 OR1E3Q8WZA6 343 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TIMP4Q99727 224 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TTYH2Q9BSA4 534 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TRIM36Q9NQ86 728 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CMC2Q9NRP2 79 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TNRC6BQ9UPQ9 1833 aaKnown RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 FAM240BA0A1B0GVZ2 78 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CDHR4A6H8M9 788 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 SLC22A31A6NKX4 558 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 P2RX6O15547 441 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 PLOD3O60568 738 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CTSVO60911 334 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 PSKH1P11801 424 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 IFI30P13284 250 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 PRG2P13727 222 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 AK4P27144 223 aaPredicted RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CAPZA2P47755 286 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 SNRPNP63162 240 aaKnown RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TATDN3Q17R31 274 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 CCNJQ5T5M9 372 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 GARNL3Q5VVW2 1013 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 WDR88Q6ZMY6 472 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 GPALPP1Q8IXQ4 340 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 SIPA1Q96FS4 1042 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 FYTTD1Q96QD9 318 aaKnown RBP13.45□□□□□ -0.26
CDCA3-207ENST00000538862 TMEM246Q9BRR3 403 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 MALT1Q9UDY8 824 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 PILRAQ9UKJ1 303 aa13.45□□□□□ -0.26
CDCA3-207ENST00000538862 DAPL1A0PJW8 107 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 POM121BA6NF01 834 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FAM25AB3EWG3 89 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FAM25CB3EWG5 89 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FAM25GB3EWG6 89 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 PLPP2O43688 288 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 SLC43A1O75387 559 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 MT-ND5P03915 603 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 INPP1P49441 399 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 CTBP2P56545 445 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 TAS2R43P59537 309 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 SHC2P98077 582 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FOXK2Q01167 660 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 MADCAM1Q13477 382 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 NFATC4Q14934 902 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FCRL6Q6DN72 434 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 FIGLAQ6QHK4 219 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 LRRC28Q86X40 367 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 TRIM48Q8IWZ4 208 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 TMEM99Q8N816 258 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 COX18Q8N8Q8 333 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 OR5M3Q8NGP4 307 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 OR5W2Q8NH69 310 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 PFN4Q8NHR9 129 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 RSC1A1Q92681 617 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 KISS1RQ969F8 398 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 ADAP2Q9NPF8 381 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 POLE3Q9NRF9 147 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 C14orf105Q9NVL8 296 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 PAQR5Q9NXK6 330 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 SCML1Q9UN30 329 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 BAIAP2Q9UQB8 552 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
CDCA3-207ENST00000538862 SPACA6W5XKT8 324 aa13.44□□□□□ -0.26
CDCA3-207ENST00000538862 PRR23D1E9PI22 279 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-207ENST00000538862 DNAJB6O75190 326 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 GKN3PP0CG01 181 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PRR23D2P0DMB1 279 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-207ENST00000538862 UGT2B7P16662 529 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ELK1P19419 428 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ERP29P30040 261 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms