RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 POLR2J2Q9GZM3 115 aaKnown RBP12.89□□□□□ -0.35
CD4-208ENST00000538827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.89□□□□□ -0.35
CD4-208ENST00000538827 POLR2J3Q9H1A7 115 aaKnown RBP12.89□□□□□ -0.35
CD4-208ENST00000538827 ZNF552Q9H707 407 aaPredicted RBP12.89□□□□□ -0.35
CD4-208ENST00000538827 MED11Q9P086 117 aa12.89□□□□□ -0.35
CD4-208ENST00000538827 PDP1Q9P0J1 537 aaPredicted RBP12.89□□□□□ -0.35
CD4-208ENST00000538827 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
CD4-208ENST00000538827 UBR5O95071 2799 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 TRBV4-1A0A0J9YWV2 114 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 G3V2T6 193 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ADAM10O14672 748 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 SLC25A12O75746 678 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 CCNB2O95067 398 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 GP1BBP13224 206 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 FUT4P22083 530 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ELAVL4P26378 380 aaKnown RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 VHLP40337 213 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 GPR85P60893 370 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 SNTA1Q13424 505 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 LY6DQ14210 128 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 QPRTQ15274 297 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 DCST1Q5T197 706 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ZNF613Q6PF04 617 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 SHQ1Q6PI26 577 aaKnown RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 APLFQ8IW19 511 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 GALNT4Q8N4A0 578 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 OR4C15Q8NGM1 316 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 OR5W2Q8NH69 310 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ANGPTL4Q9BY76 406 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 KLHL4Q9C0H6 718 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 VCXQ9H320 206 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 DSN1Q9H410 356 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 NMNAT1Q9HAN9 279 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 SH2D2AQ9NP31 389 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 TAS2R10Q9NYW0 307 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 DKKL1Q9UK85 242 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ACAD8Q9UKU7 415 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
CD4-208ENST00000538827 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 SPTAN1Q13813 2472 aaKnown RBP12.88□□□□□ -0.35
CD4-208ENST00000538827 A0A0B4J2E0 115 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 A0A1B0GX12 115 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 FAAHO00519 579 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 EI24O14681 340 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 SNPHO15079 494 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 NTN1O95631 604 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 ZNF41P51814 821 aaPredicted RBP12.87□□□□□ -0.35
CD4-208ENST00000538827 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
CD4-208ENST00000538827 ALG10BQ5I7T1 473 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 PODNL1Q6PEZ8 512 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 ZNF730Q6ZMV8 503 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 ZBTB49Q6ZSB9 765 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 PACS2Q86VP3 889 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 ZNF227Q86WZ6 799 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 NKAIN4Q8IVV8 208 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 CBR4Q8N4T8 237 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 OR2M3Q8NG83 312 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 OR9Q2Q8NGE9 314 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 GIPC3Q8TF64 312 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 SLC38A4Q969I6 547 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 BARD1Q99728 777 aaKnown RBP12.87□□□□□ -0.35
CD4-208ENST00000538827 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 COQ10BQ9H8M1 238 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 HHATLQ9HCP6 504 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 VDAC3Q9Y277 283 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 PCNX3Q9H6A9 2034 aa12.87□□□□□ -0.35
CD4-208ENST00000538827 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 K7ENP7 123 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 KPNA4O00629 521 aaPredicted RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 SOCS2O14508 198 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 CHP2O43745 196 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 PIP5K1CO60331 668 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 OR10H3O60404 316 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 DPM1O60762 260 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 NEURL1O76050 574 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 SNX4O95219 450 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 THY1P04216 161 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 CD46P15529 392 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 CCNA2P20248 432 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 PRKACGP22612 351 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 MSX1P28360 303 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms