RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PEX2P28328 305 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC1A3P43003 542 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DNASE1L1P49184 302 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF136P52737 540 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 IST1P53990 364 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RAD23AP54725 363 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 UGT2B15P54855 530 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KCNAB2Q13303 367 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SKP2Q13309 424 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NPTX1Q15818 432 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MICAQ29983 383 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF766Q5HY98 468 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PODNL1Q6PEZ8 512 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CBLN3Q6UW01 205 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 COMTD1Q86VU5 262 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OFCC1Q8IZS5 231 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CBR4Q8N4T8 237 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF555Q8NEP9 628 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR14L1PQ8NHC6 308 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HAS2Q92819 552 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ARSGQ96EG1 525 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MPP4Q96JB8 637 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 WFDC6Q9BQY6 131 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OSBPL10Q9BXB5 764 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF552Q9H707 407 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EXO5Q9H790 373 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 COQ10BQ9H8M1 238 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ACER3Q9NUN7 267 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 A4GNTQ9UNA3 340 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CHST2Q9Y4C5 530 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LYVE1Q9Y5Y7 322 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SPIN1Q9Y657 262 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 A0A087WZY1 265 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TRAV17A0A0B4J275 112 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 A0A1W2PRQ8 180 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ACOT7O00154 380 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 KPNA4O00629 521 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 CHP2O43745 196 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DPM1O60762 260 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 BCAS1O75363 584 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HIST1H2ABP04908 130 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 POU2F1P14859 743 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DPP4P27487 766 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GTF2E2P29084 291 aaKnown RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TACR3P29371 465 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ACAA2P42765 397 aaKnown RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 POLR2HP52434 150 aaKnown RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TLE3Q04726 772 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DAG1Q14118 895 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DGCR6Q14129 220 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 FNDC7Q5VTL7 733 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HIST3H2AQ7L7L0 130 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 AQP11Q8NBQ7 271 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GPR119Q8TDV5 335 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM239Q8WW34 195 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ACOT11Q8WXI4 607 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ST8SIA1Q92185 356 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GATA6Q92908 595 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HIST1H2ACQ93077 130 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 GTPBP3Q969Y2 492 aaKnown RBP9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM41AQ96HV5 264 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SIGLEC12Q96PQ1 595 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 Q9H521 79 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ANKRD19PQ9H560 264 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 KRT84Q9NSB2 600 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ENOPH1Q9UHY7 261 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PRDM4Q9UKN5 801 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ICAM5Q9UMF0 924 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MGAT4BQ9UQ53 548 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ACACBO00763 2458 aa9.71□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMED7-TICAM2A0A0A6YYA0 188 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TRBV4-1A0A0J9YWV2 114 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 K7ENP7 123 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 EI24O14681 340 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 FFAR1O14842 300 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 CASQ2O14958 399 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RASAL1O95294 804 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 SAGP10523 405 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 IFI30P13284 250 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 PTNP21246 168 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 IGFBP5P24593 272 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HTR2AP28223 471 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 EIF1P41567 113 aaKnown RBP9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 HSPA13P48723 471 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 MEOX1P50221 254 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 ALDH3A2P51648 485 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 DSCR4P56555 118 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RFX4Q33E94 735 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 OGFRL1Q5TC84 451 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 RAET1LQ5VY80 246 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TIGD3Q6B0B8 471 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 TMEM81Q6P7N7 255 aa9.7□□□□□ -0.86
TNFRSF1A-211ENST00000538363 INO80CQ6PI98 192 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms