RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PSMB10P40306 273 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 RTL6Q6ICC9 239 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ADIPOR2Q86V24 386 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 OR2A12Q8NGT7 310 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 OR11L1Q8NGX0 322 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 PDLIM5Q96HC4 596 aaKnown RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 TRAV27A0A087WT01 109 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 TMEM269A0A1B0GVZ9 245 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 CBX7O95931 251 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 GPX3P22352 226 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 FAM160A2Q8N612 972 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 IL1F10Q8WWZ1 152 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF223Q9UK11 482 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 HS3ST2Q9Y278 367 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ANKRD34BA5PLL1 514 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF264O43296 627 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 CXCR4P61073 352 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 MRPS10P82664 201 aaKnown RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 TMEM176BQ3YBM2 270 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 B3GNT9Q6UX72 402 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 H3BNC9 293 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 CDK5R2Q13319 367 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF169Q14929 603 aaPredicted RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 TRIM61Q5EBN2 209 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 PDZD9Q8IXQ8 264 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 PIGCQ92535 297 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 ARRDC3Q96B67 414 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 VN1R3Q9BXE9 311 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 SLC25A18Q9H1K4 315 aa15.73■□□□□ 0.11
SCARB1-205ENST00000538291 DDX31Q9H8H2 851 aaKnown RBP15.73■□□□□ 0.11
SCARB1-205ENST00000538291 SETD1AO15047 1707 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 EN2P19622 333 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MAGEA6P43360 314 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 KCTD20Q7Z5Y7 419 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 GTPBP8Q8N3Z3 284 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 DNAJC22Q8N4W6 341 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 OR6C1Q96RD1 312 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 TMEM246Q9BRR3 403 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 SLC22A5O76082 557 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 AIFM1O95831 613 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 GABRA2P47869 451 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 SLC22A6Q4U2R8 563 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 ACSM3Q53FZ2 586 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 CTSL3PQ5NE16 218 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 C9orf135Q5VTT2 229 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 ANKRD54Q6NXT1 300 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MEX3BQ6ZN04 569 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 FAM83HQ6ZRV2 1179 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.72■□□□□ 0.118e-8■□□□□ 9.4
SCARB1-205ENST00000538291 ASB17Q8WXJ9 295 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 ZBED3Q96IU2 234 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MYO9BQ13459 2157 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 AHDC1Q5TGY3 1603 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 NOTOA8MTQ0 251 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 ALDOBP05062 364 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 SLC5A2P31639 672 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 PPP5CP53041 499 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 TPRA1Q86W33 373 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 STEAP2Q8NFT2 490 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 OR14K1Q8NGZ2 314 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 ITFG2Q969R8 447 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 INPP5EQ9NRR6 644 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 LRFN1Q9P244 771 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 TMEM181Q9P2C4 612 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 DCNP07585 359 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 IL2RGP31785 369 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 GPR18Q14330 331 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 VASNQ6EMK4 673 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 UCN3Q969E3 161 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MSI2Q96DH6 328 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 GAREM1Q9H706 876 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 KCND3Q9UK17 655 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 KDM4EB2RXH2 506 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 LYRM1O43325 122 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 TP53P04637 393 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 AKAIN1P0CW23 69 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MAT1AQ00266 395 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 CAMK2DQ13557 499 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 SMAD2Q15796 467 aaKnown RBP15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MISPQ8IVT2 679 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 MCOLN1Q9GZU1 580 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 TWSG1Q9GZX9 223 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 EBF1Q9UH73 591 aa15.72■□□□□ 0.11
SCARB1-205ENST00000538291 LRP6O75581 1613 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 AQP2P41181 271 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 TNFRSF17Q02223 184 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 PODNL1Q6PEZ8 512 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 AAED1Q7RTV5 226 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 MEX3DQ86XN8 651 aaKnown RBP15.71■□□□□ 0.11
SCARB1-205ENST00000538291 SSX3Q99909 188 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 GCM1Q9NP62 436 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 TOPAZ1Q8N9V7 1692 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 GPR39O43194 453 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 GAAP10253 952 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 PKLRP30613 574 aa15.71■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF136P52737 540 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms