RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZDHHC12Q96GR4 267 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 OR1F2PQ96R84 312 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 IFT27Q9BW83 186 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 MED20Q9H944 212 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ADGRL4Q9HBW9 690 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 PRODH2Q9UF12 536 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 CHRNA9Q9UGM1 479 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GMEB2Q9UKD1 530 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 A0A087WUJ7 227 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 PIAS2O75928 621 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 HLA-DPB1P04440 258 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 PEPDP12955 493 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SLC6A6P31641 620 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TGM4P49221 684 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GPR143P51810 404 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 RPS4XP62701 263 aaKnown RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 RUNX1T1Q06455 604 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 HNRNPA0Q13151 305 aaKnown RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GGTLC2Q14390 218 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 DEFB133Q30KQ1 61 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ARHGAP11AQ6P4F7 1023 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 RTL4Q6ZR62 310 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF440Q8IYI8 595 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SYT14Q8NB59 555 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 PTPMT1Q8WUK0 201 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 KIAA1143Q96AT1 154 aaPredicted RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 ARSGQ96EG1 525 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 SLC19A3Q9BZV2 496 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 EXOSC3Q9NQT5 275 aaKnown RBP8.56□□□□□ -1.04
UBE3B-207ENST00000537063 LRIT1Q9P2V4 623 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 TBC1D24Q9ULP9 559 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 GSTK1Q9Y2Q3 226 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 RNF215Q9Y6U7 377 aa8.56□□□□□ -1.04
UBE3B-207ENST00000537063 HTR3EA5X5Y0 456 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 C12orf71A8MTZ7 269 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 PRR23D1E9PI22 279 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 GABRPO00591 440 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 PRR23D2P0DMB1 279 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SAGP10523 405 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SPNP16150 400 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 MAOBP27338 520 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SLC37A1P57057 533 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ISXQ2M1V0 245 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TMPRSS11AQ6ZMR5 421 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 POC5Q8NA72 575 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 OR51G2Q8NGK0 314 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 DNASE2BQ8WZ79 361 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 C1GALT1C1Q96EU7 318 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TEAD3Q99594 435 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SOSTQ9BQB4 213 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ALG8Q9BVK2 526 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 UCKL1Q9NWZ5 548 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 IGKV3-11P04433 115 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 CAPZA2P47755 286 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 RPL6Q02878 288 aaKnown RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TMEM91Q6ZNR0 172 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 OAFQ86UD1 273 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SLITRK4Q8IW52 837 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 CAMKK1Q8N5S9 505 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ATP6V1C2Q8NEY4 427 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 AHCYL2Q96HN2 611 aaKnown RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 CEP19Q96LK0 163 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TNFRSF13CQ96RJ3 184 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ISG20L2Q9H9L3 353 aaKnown RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 CUTCQ9NTM9 273 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SOHLH2Q9NX45 425 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 WNT16Q9UBV4 365 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ZC3H12DA2A288 527 aaKnown RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 OR2W5A6NFC9 320 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 PPP1R3DO95685 299 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 IL33O95760 270 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF3P17036 446 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 HK1P19367 917 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 NOS3P29474 1203 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 UBXN2BQ14CS0 331 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SLC35F1Q5T1Q4 408 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 GDPD3Q7L5L3 318 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SPEM1Q8N4L4 309 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ZFP41Q8N8Y5 198 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 OR4C3Q8NH37 302 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 AP3S1Q92572 193 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 C3orf49Q96BT1 292 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TXNDC15Q96J42 360 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 HSPA12BQ96MM6 686 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 GPX7Q96SL4 187 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 DDOQ99489 341 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 FOXQ1Q9C009 403 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 HOXD1Q9GZZ0 328 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 CAPN10Q9HC96 672 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 BABAM2Q9NXR7 383 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 ZMIZ1Q9ULJ6 1067 aa8.55□□□□□ -1.04
UBE3B-207ENST00000537063 SIRT4Q9Y6E7 314 aaPredicted RBP8.55□□□□□ -1.04
UBE3B-207ENST00000537063 TNRC6BQ9UPQ9 1833 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 IGKV1D-42A0A075B6H8 117 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 IGHV1OR21-1A0A087WYE8 117 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SHISA3A0PJX4 238 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms