RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 HCN1O60741 890 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 MED6O75586 246 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 LALBAP00709 142 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF286BP0CG31 522 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 RNH1P13489 461 aaKnown RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ETS1P14921 441 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 COX7A1P24310 79 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 CYLC1P35663 651 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 MAGEA5P43359 124 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 MAP2K1Q02750 393 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 CCDC173Q0VFZ6 552 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ATXN7L3Q14CW9 347 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 CHI3L2Q15782 390 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 FAHD2BQ6P2I3 314 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ARMCX2Q7L311 632 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ANKRD37Q7Z713 158 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 BCORP1Q8N888 145 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 MINDY2Q8NBR6 621 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 M1APQ8TC57 530 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 MGARPQ8TDB4 240 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 C14orf79Q96F83 325 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 FAHD2AQ96GK7 314 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 VPS35Q96QK1 796 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 SPXQ9BT56 116 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 GSDMCQ9BYG8 508 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF385DQ9H6B1 395 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 SLC25A22Q9H936 323 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 ACTR8Q9H981 624 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 VAT1LQ9HCJ6 419 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 SPASTQ9UBP0 616 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 FOXJ3Q9UPW0 622 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 OARD1Q9Y530 152 aa2.38□□□□□ -2.03
CCDC7-208ENST00000537047 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-208ENST00000537047 A0A096LNJ9 63 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 NKX2-6A6NCS4 301 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 NBR2O15453 112 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ECI2O75521 394 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 SLITRK3O94933 977 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 KIF5BP33176 963 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ATXN3P54252 364 aaPredicted RBP2.37□□□□□ -2.03
CCDC7-208ENST00000537047 PRPS1P60891 318 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 LAGE3Q14657 143 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 Q5W150 140 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ACSM5Q6NUN0 579 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 CENPUQ71F23 418 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 MISPQ8IVT2 679 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF713Q8N859 430 aaPredicted RBP2.37□□□□□ -2.03
CCDC7-208ENST00000537047 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 RNF185Q96GF1 192 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 AKR1E2Q96JD6 320 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 RNF126Q9BV68 326 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 ASF1AQ9Y294 204 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 KNSTRNQ9Y448 316 aa2.37□□□□□ -2.03
CCDC7-208ENST00000537047 DHX57Q6P158 1386 aaKnown RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 RNF103-CHMP3A0A140T963 221 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 A0A1B0GWB2 263 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 PP2D1A8MPX8 630 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 RASGRF2O14827 1237 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 JAK2O60674 1132 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 UGT2B17O75795 530 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 TGFAP01135 160 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 PAICSP22234 425 aaKnown RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 ASMTP46597 345 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 SH3BGRP55822 239 aaPredicted RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 RIPPLY1Q0D2K3 151 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 PPP2R5CQ13362 524 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 GGTLC2Q14390 218 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 SF3A2Q15428 464 aaKnown RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 MAPK6Q16659 721 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 C1orf146Q5VVC0 180 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 C16orf62Q7Z3J2 963 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 C15orf54Q8N8G6 183 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 CELF6Q96J87 481 aaKnown RBP2.36□□□□□ -2.03
CCDC7-208ENST00000537047 FAM210BQ96KR6 192 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 CITED1Q99966 193 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 AIG1Q9NVV5 245 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 TREM2Q9NZC2 230 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 ANAPC7Q9UJX3 599 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 MGAT4BQ9UQ53 548 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 UGT2A1Q9Y4X1 527 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 WIF1Q9Y5W5 379 aa2.36□□□□□ -2.03
CCDC7-208ENST00000537047 ESYT2A0FGR8 921 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 STX7O15400 261 aaKnown RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF780AO75290 641 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 SLC25A27O95847 323 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 ATP6V1E1P36543 226 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 LONP1P36776 959 aaKnown RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 BDKRB1P46663 353 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 HSF2Q03933 536 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 ARL6IP1Q15041 203 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 TRIP10Q15642 601 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 TMEM52BQ4KMG9 183 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 CCDC184Q52MB2 194 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 ZNF311Q5JNZ3 666 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 RAET1GQ6H3X3 334 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms