RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HPCAP84074 193 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 MERTKQ12866 999 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 FRRS1Q6ZNA5 592 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 SPATA19Q7Z5L4 167 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 CXorf67Q86X51 503 aaPredicted RBP12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 ZNF619Q8N2I2 560 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 ARL8AQ96BM9 186 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 MARK4Q96L34 752 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 OR52E6Q96RD3 313 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 ZBTB18Q99592 522 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 INPP5KQ9BT40 448 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
RTN3P1-201ENST00000536295 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 CCDC154A6NI56 674 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 GSNP06396 782 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 PGRP06401 933 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 PGM1P36871 562 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 NKX6-1P78426 367 aaPredicted RBP12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 CHRNEQ04844 493 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ACKR1Q16570 336 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ZNF621Q6ZSS3 439 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ZNF563Q8TA94 476 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 PNPT1Q8TCS8 783 aaKnown RBP12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ST8SIA1Q92185 356 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 DNAJA3Q96EY1 480 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 CCL19Q99731 98 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 SERINC1Q9NRX5 453 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 SLC35A3Q9Y2D2 325 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 GPR45Q9Y5Y3 372 aa12.72□□□□□ -0.37
RTN3P1-201ENST00000536295 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 PRAMEF27A3QJZ7 478 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 ETV2O00321 342 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 HMGN4O00479 90 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 KLF4O43474 513 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 SMPD2O60906 423 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 ERLIN1O75477 346 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 YES1P07947 543 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 TFPIP10646 304 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 HOXC12P31275 282 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 RAC3P60763 192 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 SYPL1Q16563 259 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 BEX5Q5H9J7 111 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 PLEKHM3Q6ZWE6 761 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 P3H2Q8IVL5 708 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 ANKFN1Q8N957 763 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 S100PBPQ96BU1 408 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 PSD2Q9BQI7 771 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 MANSC1Q9H8J5 431 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 TMBIM4Q9HC24 238 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 ACER3Q9NUN7 267 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 KLHL9Q9P2J3 617 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 VPS13CQ709C8 3753 aa12.71□□□□□ -0.37
RTN3P1-201ENST00000536295 C2CD3Q4AC94 2353 aa12.71□□□□□ -0.38
RTN3P1-201ENST00000536295 SMAD9O15198 467 aaKnown RBP12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 DNAJA2O60884 412 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 GCM2O75603 506 aaPredicted RBP12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 ADAP00813 363 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 FESP07332 822 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 CHRM4P08173 479 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 CCNA2P20248 432 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 PSMB1P20618 241 aaKnown RBP12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 FPR1P21462 350 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 IL32P24001 234 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 DIO1P49895 249 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 KCNJ10P78508 379 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 RASGEF1BQ0VAM2 473 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 SLC9B1Q4ZJI4 515 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 SYT14P1Q58G82 188 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 COX20Q5RI15 118 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 ZNF704Q6ZNC4 412 aaPredicted RBP12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 GABRG1Q8N1C3 465 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
RTN3P1-201ENST00000536295 FAM71CQ8NEG0 241 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms