RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CD1CP29017 333 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 FCGR2BP31994 310 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 FCGR2CP31995 323 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 GTF2H1P32780 548 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SOX3P41225 446 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 STK19P49842 368 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 CRYBA2P53672 197 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 KCNK10P57789 538 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 OR1D5P58170 312 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 DAOAP59103 153 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SSTP61278 116 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 RPS24P62847 133 aaKnown RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 UBXN1Q04323 297 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 CEACAM7Q14002 265 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 EXT1Q16394 746 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 KNOP1Q1ED39 458 aaKnown RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF630Q2M218 657 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 MRGPRG-AS1Q2M3A8 158 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 KLHL40Q2TBA0 621 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 MOGAT2Q3SYC2 334 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ZC2HC1BQ5TFG8 222 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 CES4AQ5XG92 561 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 OLFML2AQ68BL7 652 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SPECC1LQ69YQ0 1117 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ETFRF1Q6IPR1 90 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 BHLHB9Q6PI77 547 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 IGFL3Q6UXB1 125 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SCARA5Q6ZMJ2 495 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 TMUB2Q71RG4 321 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 BIVMQ86UB2 503 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 VPS36Q86VN1 386 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 C17orf64Q86WR6 236 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 CBWD2Q8IUF1 395 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC170Q8IYT3 715 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 LRTM2Q8N967 370 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 NECAB1Q8N987 351 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 OR5M9Q8NGP3 310 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 OR2A12Q8NGT7 310 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 C8orf46Q8TAG6 207 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 WFDC5Q8TCV5 224 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 NPRL2Q8WTW4 380 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 GTF3AQ92664 365 aaKnown RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 DNAJC19Q96DA6 116 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 RBM41Q96IZ5 413 aaKnown RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 RPRD1AQ96P16 312 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF300Q96RE9 604 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 KLF6Q99612 283 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 RBM24Q9BX46 236 aaKnown RBP2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ULBP3Q9BZM4 244 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 TRIM15Q9C019 465 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SMYD3Q9H7B4 428 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 MAGEF1Q9HAY2 307 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 RDH14Q9HBH5 336 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 POPDC2Q9HBU9 364 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 MCCC2Q9HCC0 563 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 SENP1Q9P0U3 644 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF319Q9P2F9 582 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 MOSPD1Q9UJG1 213 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 DOCK10Q96BY6 2186 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
SNHG1-202ENST00000535689 IGHV1OR21-1A0A087WYE8 117 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 PVALEFA0A1B0GWK0 134 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 BICDL2A1A5D9 508 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CCDC162PA2VCL2 907 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 A4D1N5 150 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 A8MU76 341 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 MPTX1A8MV57 137 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 H7C423 109 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 PDXKO00764 312 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 TNFSF12O43508 249 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 MED7O43513 233 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 SYT7O43581 403 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CALUO43852 315 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-202ENST00000535689 FMO6PO60774 539 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 HLA-DRAP01903 254 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 FGF1P05230 155 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 RHOCP08134 193 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 PAEPP09466 180 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CFC1BP0CG36 223 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CFC1P0CG37 223 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 THRAP10827 490 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 KRT5P13647 590 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 STMN1P16949 149 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 PTPN4P29074 926 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 PDHA2P29803 388 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 OR1E1P30953 314 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 TRIM23P36406 574 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 HNF4AP41235 474 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CCR4P51679 360 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CASP9P55211 416 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 CSNK2BP67870 215 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 ACY1Q03154 408 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 ADIGQ0VDE8 80 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 KIAA0141Q14154 515 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-202ENST00000535689 FASTKQ14296 549 aaKnown RBP2.77□□□□□ -1.97
SNHG1-202ENST00000535689 TRADDQ15628 312 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 IL17AQ16552 155 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 NADK2Q4G0N4 442 aa2.77□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM52BQ4KMG9 183 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms