RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 ETS2P15036 469 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 RYKP34925 604 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 DLX5P56178 289 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 LIPEQ05469 1076 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 EPS8Q12929 822 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 GANABQ14697 944 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 KRT72Q14CN4 511 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 DUSP7Q16829 419 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 LIN52Q52LA3 116 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 DHRS4L2Q6PKH6 230 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 EIF3MQ7L2H7 374 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 GDF7Q7Z4P5 450 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 ADGRE4PQ86SQ3 457 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 RBM45Q8IUH3 476 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 PCYOX1LQ8NBM8 494 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 C11orf65Q8NCR3 313 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 NAXEQ8NCW5 288 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 RBM15BQ8NDT2 890 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 OR10Q1Q8NGQ4 319 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 ABTB1Q969K4 478 aaPredicted RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 CCDC120Q96HB5 630 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 REXO5Q96IC2 774 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 ZNF845Q96IR2 970 aaPredicted RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 TUBA1CQ9BQE3 449 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 SPATA9Q9BWV2 254 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 RASSF4Q9H2L5 321 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 EXO5Q9H790 373 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 COQ10BQ9H8M1 238 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
CHFR-210ENST00000535527 TMEM181Q9P2C4 612 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
CHFR-210ENST00000535527 DCHS2Q6V1P9 2916 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 OR14I1A6ND48 311 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 M0QX08 132 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 M0R3H8 397 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 PEPDP12955 493 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 NCK1P16333 377 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 IL7RP16871 459 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 ZNF17P17021 662 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 MSX1P28360 303 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 CLK3P49761 638 aaKnown RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 NUP107P57740 925 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 SESN3P58005 492 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 RBBP4Q09028 425 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 ART3Q13508 389 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 CEACAM7Q14002 265 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 ACSF3Q4G176 576 aaPredicted RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 ZNF311Q5JNZ3 666 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 ZNF585AQ6P3V2 769 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 RPTNQ6XPR3 784 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 PLEKHM3Q6ZWE6 761 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 CCDC80Q76M96 950 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 GRAMD2AQ8IUY3 354 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 PEX5LQ8IYB4 626 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 UBQLNLQ8IYU4 475 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 MICU2Q8IYU8 434 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 OIT3Q8WWZ8 545 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 SMPDL3BQ92485 455 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 CMTM5Q96DZ9 223 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 EFCAB1Q9HAE3 211 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 GID8Q9NWU2 228 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 THUMPD1Q9NXG2 353 aaKnown RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 CALML5Q9NZT1 146 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 ANGPT4Q9Y264 503 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 MEMO1Q9Y316 297 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 KLF2Q9Y5W3 355 aaPredicted RBP11.79□□□□□ -0.52
CHFR-210ENST00000535527 FREM1Q5H8C1 2179 aa11.79□□□□□ -0.52
CHFR-210ENST00000535527 MTORP42345 2549 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 A0A0J9YW62 118 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 C5orf58C9J3I9 102 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 SEC14L5O43304 696 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 ZG16O60844 167 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 LYPD3O95274 346 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 THY1P04216 161 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 CHMP24386 653 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 PRKAR1BP31321 381 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 MSX2P35548 267 aaPredicted RBP11.78□□□□□ -0.52
CHFR-210ENST00000535527 SRYQ05066 204 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 NRF1Q16656 503 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 CMIPQ8IY22 773 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 PGAM4Q8N0Y7 254 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 METTL25Q8N6Q8 603 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 TOR1AIP2Q8NFQ8 470 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 SARAFQ96BY9 339 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 ARHGDIGQ99819 225 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 ECSITQ9BQ95 431 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
CHFR-210ENST00000535527 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms