RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 COQ10BQ9H8M1 238 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 MTHFD2LQ9H903 347 aaPredicted RBP12.37□□□□□ -0.43
TMEM258-203ENST00000535297 TIGARQ9NQ88 270 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 ACER3Q9NUN7 267 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 ZNF446Q9NWS9 450 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 CCDC167Q9P0B6 97 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 EMC9Q9Y3B6 208 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 DSPPQ9NZW4 1301 aa12.37□□□□□ -0.43
TMEM258-203ENST00000535297 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PLGP00747 810 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 DBIP07108 87 aaKnown RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PABPC4LP0CB38 370 aaKnown RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 NID1P14543 1247 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 SLC7A1P30825 629 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 CPOXP36551 454 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 CRISP3P54108 245 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 CARD18P57730 90 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 SESN3P58005 492 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PLAURQ03405 335 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 FADDQ13158 208 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 MAPK11Q15759 364 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PLEKHM3Q6ZWE6 761 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 HMGN2P46Q86SG4 172 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PEX5LQ8IYB4 626 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 SLC25A43Q8WUT9 341 aaPredicted RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 SERINC1Q9NRX5 453 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 DNAJB12Q9NXW2 375 aaKnown RBP12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PROCRQ9UNN8 238 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 PCDHB14Q9Y5E9 798 aa12.36□□□□□ -0.43
TMEM258-203ENST00000535297 CLDN24A6NM45 220 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 CLIC1O00299 241 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 GOSR1O95249 250 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 CGAP01215 116 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 BCHEP06276 602 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 TFPTP0C1Z6 253 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 BMP2P12643 396 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 IL7RP16871 459 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 PPIBP23284 216 aaKnown RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 CTBP2P56545 445 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 MERTKQ12866 999 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 DAZAP2Q15038 168 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 RGNQ15493 299 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 AGKQ53H12 422 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 GTF2IRD2BQ6EKJ0 949 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 GRINAQ7Z429 371 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 GTF2IRD2Q86UP8 949 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 CNOT9Q92600 299 aaKnown RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 REXO5Q96IC2 774 aaKnown RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 OPN3Q9H1Y3 402 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 ZNF385DQ9H6B1 395 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 NPHS2Q9NP85 383 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 SLC52A3Q9NQ40 469 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 ELOVL5Q9NYP7 299 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 SPIN1Q9Y657 262 aaPredicted RBP12.35□□□□□ -0.43
TMEM258-203ENST00000535297 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 PDZD2O15018 2839 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 SPG11Q96JI7 2443 aa12.35□□□□□ -0.43
TMEM258-203ENST00000535297 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 FAM221AA4D161 298 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 A6NNC1 897 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 FAAHO00519 579 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CTAG2O75638 210 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 EPXP11678 715 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 UQCRBP14927 111 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 RYKP34925 604 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CD79BP40259 229 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 RAC3P60763 192 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
TMEM258-203ENST00000535297 ZSWIM7Q19AV6 140 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
TMEM258-203ENST00000535297 PRAMEF8Q5VWM4 474 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 PRAMEF7Q5VXH5 474 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 ZNF440Q8IYI8 595 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 SLC38A5Q8WUX1 472 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
TMEM258-203ENST00000535297 TMEM19Q96HH6 336 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 DACH2Q96NX9 599 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 SLC39A3Q9BRY0 314 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CCDC106Q9BWC9 280 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CACYBPQ9HB71 228 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms