RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNRD1Q9P1U0 126 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 MIOXQ9UGB7 285 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 ZNF337Q9Y3M9 751 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 HEBP2Q9Y5Z4 205 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 GPATCH8Q9UKJ3 1502 aaKnown RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 SHANK1Q9Y566 2161 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 LAMB2P55268 1798 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 IGHV3OR16-13A0A075B7E8 117 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 C13orf42A0A1B0GVH6 325 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 A0A1B0GWB2 263 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 OOEPA6NGQ2 149 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 PHGR1C9JFL3 82 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 H0YL77 283 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 H3BMH7 237 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 LGALS9O00182 355 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 XKRYO14609 159 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ADCY5O95622 1261 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 IGLV2-8P01709 118 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 SERPINB6P35237 376 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 NOVA1P51513 510 aaKnown RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 RPS11P62280 158 aaKnown RBP eCLIP0.05□□□□□ -2.4
COPB1-212ENST00000534771 PITPNAQ00169 270 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 SRYQ05066 204 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ZNF616Q08AN1 781 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 SMARCB1Q12824 385 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ZNF235Q14590 738 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 PARP6Q2NL67 630 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 RFX4Q33E94 735 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD20A4Q4UJ75 823 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 AGKQ53H12 422 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 BOLA3Q53S33 107 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 C1orf141Q5JVX7 400 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD20A2Q5SQ80 823 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 MARCH8Q5T0T0 291 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD20A1Q5TYW2 823 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD20A3Q5VUR7 823 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 NKAIN2Q5VXU1 208 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 KCTD11Q693B1 232 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 PVRIGQ6DKI7 326 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 TTC19Q6DKK2 380 aaPredicted RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 LEG1Q6P5S2 330 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ACOT7LQ6ZUV0 252 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 KRT74Q7RTS7 529 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 LRRC70Q7Z2Q7 622 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 NET1Q7Z628 596 aaPredicted RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 SIAH3Q8IW03 269 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 TUSC5Q8IXB3 177 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 C1orf64Q8NEQ6 169 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 Q8NFD4 153 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 OR6C4Q8NGE1 309 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 OR10G9Q8NGN4 311 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 FANK1Q8TC84 345 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 BRSK1Q8TDC3 778 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 FAM162AQ96A26 154 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 TMEM159Q96B96 161 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 L3HYPDHQ96EM0 354 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 CCDC51Q96ER9 411 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 CFAP36Q96G28 342 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 EPSTI1Q96J88 318 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 C18orf15Q96N68 181 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 MCHR1Q99705 422 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 NAP1L4Q99733 375 aaKnown RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 RNF5Q99942 180 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ZNF416Q9BWM5 594 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 SPATA16Q9BXB7 569 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANGPTL4Q9BY76 406 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 SELENOIQ9C0D9 397 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 TUFT1Q9NNX1 390 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 GALPQ9UBC7 116 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 PCYOX1Q9UHG3 505 aa0.05□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 RP1L1Q8IWN7 2480 aaPredicted RBP0.05□□□□□ -2.4
COPB1-212ENST00000534771 PCM1Q15154 2024 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 IGHV5-51A0A0C4DH38 117 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 A0A1B0GVX0 72 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 PLAC8L1A1L4L8 177 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 E9PBE3 544 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 SGK1O00141 431 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CASKO14936 926 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 SOCS1O15524 211 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HCRTR1O43613 425 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CREB3O43889 395 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 JAK2O60674 1132 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CCNKO75909 580 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 UQCRFS1P1P0C7P4 283 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 BCKDHAP12694 445 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 IFI30P13284 250 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HPGDP15428 266 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 FERP16591 822 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CASTP20810 708 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 OMGP23515 440 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TMOD1P28289 359 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 NMT1P30419 496 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 CTNNA1P35221 906 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 CX3CR1P49238 355 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZNF41P51814 821 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 KPNA2P52292 529 aaKnown RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms