RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 STACQ99469 402 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 CCT7Q99832 543 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 QRSL1Q9H0R6 528 aaKnown RBP13.14□□□□□ -0.31
CTSB-230ENST00000534149 TSPYL1Q9H0U9 437 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 PIGUQ9H490 435 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 SIRT3Q9NTG7 399 aaPredicted RBP13.14□□□□□ -0.31
CTSB-230ENST00000534149 C1orf109Q9NX04 203 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 BAIAP2L1Q9UHR4 511 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 CCT8L1PA6NM43 557 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 G3V2L1 256 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 MYL2P10916 166 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 PRPH2P23942 346 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 ECHS1P30084 290 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 EFNA4P52798 201 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 GGTLC2Q14390 218 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 ZNF544Q6NX49 715 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 DEPDC4Q8N2C3 294 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 OR2T11Q8NH01 316 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 OR5W2Q8NH69 310 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 METTL2AQ96IZ6 378 aaKnown RBP13.13□□□□□ -0.31
CTSB-230ENST00000534149 FCRL1Q96LA6 429 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 HOXD1Q9GZZ0 328 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 EMCNQ9ULC0 261 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 ATP23Q9Y6H3 246 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 KCNE3Q9Y6H6 103 aa13.13□□□□□ -0.31
CTSB-230ENST00000534149 LOC100289279A0A1B0GTE1 492 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 ESPNB1AK53 854 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 SLC28A1O00337 649 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 UROSP10746 265 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 DIO1P49895 249 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 ATP12AP54707 1039 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 RPL38P63173 70 aaKnown RBP13.12□□□□□ -0.31
CTSB-230ENST00000534149 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
CTSB-230ENST00000534149 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 ZYG11AQ6WRX3 759 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
CTSB-230ENST00000534149 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 C3orf49Q96BT1 292 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 MSI2Q96DH6 328 aaKnown RBP13.12□□□□□ -0.31
CTSB-230ENST00000534149 CCDC126Q96EE4 140 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 EML4Q9HC35 981 aaKnown RBP13.12□□□□□ -0.31
CTSB-230ENST00000534149 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 FIS1Q9Y3D6 152 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
CTSB-230ENST00000534149 NPIPB9F8W1W9 429 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 H3BQF6 201 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 ETV2O00321 342 aaPredicted RBP13.11□□□□□ -0.31
CTSB-230ENST00000534149 ZNF264O43296 627 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 UBL4AP11441 157 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 FOXG1P55316 489 aaPredicted RBP13.11□□□□□ -0.31
CTSB-230ENST00000534149 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
CTSB-230ENST00000534149 TP53BP2Q13625 1128 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 CBFBQ13951 182 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 RFTN2Q52LD8 501 aaPredicted RBP13.11□□□□□ -0.31
CTSB-230ENST00000534149 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 ACMSDQ8TDX5 336 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 ADAMTS15Q8TE58 950 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 ACTRT3Q9BYD9 372 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 TAS2R16Q9NYV7 291 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 NOSIPQ9Y314 301 aaKnown RBP13.11□□□□□ -0.31
CTSB-230ENST00000534149 PMF1-BGLAPU3KQ54 211 aa13.11□□□□□ -0.31
CTSB-230ENST00000534149 IGKV3D-15A0A087WSY6 115 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 VWC2LB2RUY7 222 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 SULT2B1O00204 365 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 EIF4E2O60573 245 aaKnown RBP13.1□□□□□ -0.31
CTSB-230ENST00000534149 CYP7B1O75881 506 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 ITGA5P08648 1049 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 BMP4P12644 408 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
CTSB-230ENST00000534149 HNF1AP20823 631 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 NTF4P34130 210 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 NR4A2P43354 598 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 PDLIM4P50479 330 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 CHRNB3Q05901 458 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 MERTKQ12866 999 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 MLC1Q15049 377 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 GABRA6Q16445 453 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 TMPPEQ6ZT21 453 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 OR7A2PQ8NGA2 310 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 PIMREGQ9BSJ6 248 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
CTSB-230ENST00000534149 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 ASB6Q9NWX5 421 aa13.1□□□□□ -0.31
CTSB-230ENST00000534149 FAF1Q9UNN5 650 aaPredicted RBP13.1□□□□□ -0.31
CTSB-230ENST00000534149 IGHV4-61A0A0C4DH41 118 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms