RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 LHX3Q9UBR4 397 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 EXOGQ9Y2C4 368 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 SNX11Q9Y5W9 270 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 COL14A1Q05707 1796 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 A0A087WUU8 490 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 FAM230AA0A1W2PPH8 454 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 IFITM5A6NNB3 132 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 H7C417 338 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZNF208O43345 1280 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 AMY2AP04746 511 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ALDOBP05062 364 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PGCP20142 388 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 RFC3P40938 356 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 LIMS1P48059 325 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ARL4DP49703 201 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 RBM39Q14498 530 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 TCEAL5Q5H9L2 206 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TCEAL6Q6IPX3 200 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 NIPAL3Q6P499 406 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PET117Q6UWS5 81 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 DNAJC5GQ8N7S2 189 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZDHHC22Q8N966 263 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 BVESQ8NE79 360 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SMIM19Q96E16 107 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 LINC00615Q96LM1 132 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 LURAP1Q96LR2 239 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZNF426Q9BUY5 554 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ADAM19Q9H013 955 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 RGCCQ9H4X1 137 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 MOB1AQ9H8S9 216 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLC6A20Q9NP91 592 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PRSS16Q9NQE7 514 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 KCNIP2Q9NS61 270 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PCDHB10Q9UN67 800 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 NME7Q9Y5B8 376 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PKD1L3Q7Z443 1732 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TRAV6A0A075B6T7 132 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TSPAN11A1L157 253 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OR6C74A6NCV1 312 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 RFXAPO00287 272 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PLPP2O43688 288 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLC25A12O75746 678 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SNAI1O95863 264 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 ABHD16AO95870 558 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 KLK1P06870 262 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 CD3GP09693 182 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ACSM4P0C7M7 580 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLURP2P0DP57 97 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TAS2R46P59540 309 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 FOXK2Q01167 660 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OLIG2Q13516 323 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PIN1Q13526 163 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 DPY19L2P2Q6ZN68 376 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZNF546Q86UE3 836 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SERPINA12Q8IW75 414 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ARHGEF39Q8N4T4 335 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 CCDC71LQ8N9Z2 235 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OR4M1Q8NGD0 313 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 MAFIPQ8WZ33 124 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 YIPF5Q969M3 257 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 BPIFA2Q96DR5 249 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 GNPNAT1Q96EK6 184 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 TMED9Q9BVK6 235 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 NKX6-2Q9C056 277 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 MRPS30Q9NP92 439 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 HPF1Q9NWY4 346 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 MTFP1Q9UDX5 166 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 C19orf53Q9UNZ5 99 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 HIF3AQ9Y2N7 669 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PTGDR2Q9Y5Y4 395 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 LRIT2A6NDA9 550 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TMEM150CB9EJG8 249 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 J3QLW9 94 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OR10H2O60403 315 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OR2A4O95047 310 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLC10A3P09131 477 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 NUDT7P0C024 238 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZNF19P17023 458 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 GABRR2P28476 465 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 CRYBB2P43320 205 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PPM1FP49593 454 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 MEOX2P50222 304 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 BLKP51451 505 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 VSX2P58304 361 aaPredicted RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 MRPL58Q14197 206 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 ZNF266Q14584 549 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 C1orf189Q5VU69 101 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLC25A24Q6NUK1 477 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 TMUB2Q71RG4 321 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 RPS27LQ71UM5 84 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 TMEM150AQ86TG1 271 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 SLC38A5Q8WUX1 472 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ST8SIA2Q92186 375 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 OR2A7Q96R45 310 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 DDOQ99489 341 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 ARHGDIGQ99819 225 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 GKN1Q9NS71 199 aa3.78□□□□□ -1.8
SOX6-217ENST00000533870 PPIEQ9UNP9 301 aaKnown RBP3.78□□□□□ -1.8
SOX6-217ENST00000533870 INSL5Q9Y5Q6 135 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms