RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PGRP06401 933 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 TFPIP10646 304 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 PGCP20142 388 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 ADH6P28332 368 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 CDKN2CP42773 168 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 ANXA11P50995 505 aaKnown RBP9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SESN3P58005 492 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 CHRNEQ04844 493 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SYPL1Q16563 259 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SLC9B1Q4ZJI4 515 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 FRRS1Q6ZNA5 592 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 WFDC8Q8IUA0 241 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 ANKFN1Q8N957 763 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 RNF128Q8TEB7 428 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 TMEM234Q8WY98 164 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF524Q96C55 264 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 TLCD1Q96CP7 247 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 DNAJA3Q96EY1 480 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 COQ10BQ9H8M1 238 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 FANCFQ9NPI8 374 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 PLSCR4Q9NRQ2 329 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 SERINC1Q9NRX5 453 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 BTNL2Q9UIR0 455 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 AKAP9Q99996 3911 aa9.32□□□□□ -0.92
CAPN1-225ENST00000533704 PRAMEF27A3QJZ7 478 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CLDN24A6NM45 220 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 DEFB108AA8MXU0 73 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 HMGN4O00479 90 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 RFXANKO14593 260 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 BCAS1O75363 584 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 SLC22A3O75751 556 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 PRKD3O94806 890 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ANP32DO95626 131 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 NR2F1P10589 423 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CD99P14209 185 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 IDO1P14902 403 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CCNA2P20248 432 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ENPP1P22413 925 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CRYGSP22914 178 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 PGM1P36871 562 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 SLC18A1P54219 525 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 DEFB113Q30KQ7 82 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 SLC25A53Q5H9E4 307 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 COX20Q5RI15 118 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 C3orf33Q6P1S2 294 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 STAC2Q6ZMT1 411 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 BEND4Q6ZU67 534 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 C22orf34Q6ZV56 151 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 NUFIP2Q7Z417 695 aaKnown RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 LSRQ86X29 649 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 TUSC5Q8IXB3 177 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 RAB3IL1Q8TBN0 382 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF75CPQ92670 426 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF775Q96BV0 537 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ZG16BQ96DA0 208 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 OR52B2Q96RD2 323 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CXXC4Q9H2H0 198 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.31□□□□□ -0.92
CAPN1-225ENST00000533704 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 KLHL13Q9P2N7 655 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 SLC35A3Q9Y2D2 325 aa9.31□□□□□ -0.92
CAPN1-225ENST00000533704 CADP27708 2225 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 SULT2B1O00204 365 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 UBDO15205 165 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 KRT75O95678 551 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 CHRM4P08173 479 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 KLK2P20151 261 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 PCYT1AP49585 367 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 KCNJ10P78508 379 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 TSC22D1Q15714 1073 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 PDCD4Q53EL6 469 aaKnown RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 C6orf10Q5SRN2 563 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 AGBL2Q5U5Z8 902 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 MAVSQ7Z434 540 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 CXorf67Q86X51 503 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 TGIF2LYQ8IUE0 185 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 ARFGAP2Q8N6H7 521 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 GLB1L3Q8NCI6 653 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 OR9I1Q8NGQ6 314 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 PIWIL2Q8TC59 973 aaKnown RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 WDR60Q8WVS4 1066 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 CNOT9Q92600 299 aaKnown RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 MBD6Q96DN6 1003 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 ALPK1Q96QP1 1244 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 ACTR6Q9GZN1 396 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 HEATR1Q9H583 2144 aaKnown RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 CTPS2Q9NRF8 586 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 SLC6A13Q9NSD5 602 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 KLHL9Q9P2J3 617 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 LIPT1Q9Y234 373 aa9.3□□□□□ -0.92
CAPN1-225ENST00000533704 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-225ENST00000533704 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 AP3D1O14617 1153 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SMAD9O15198 467 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms