RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 C1QCP02747 245 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 HRGP04196 525 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PGM1P36871 562 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 SESN3P58005 492 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 KCNJ10P78508 379 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 FUT5Q11128 374 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 RNPS1Q15287 305 aaKnown RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 POU4F3Q15319 338 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 SYPL1Q16563 259 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 ZNF239Q16600 458 aaKnown RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 TMEM201Q5SNT2 666 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 EPGNQ6UW88 154 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 BEND4Q6ZU67 534 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 MAVSQ7Z434 540 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 MIER2Q8N344 545 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 ZNF563Q8TA94 476 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PNPT1Q8TCS8 783 aaKnown RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 ZNF524Q96C55 264 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 C7orf26Q96N11 449 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 MTHFD2LQ9H903 347 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 SDR39U1Q9NRG7 319 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PLEKHA6Q9Y2H5 1048 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PRRC2AP48634 2157 aaKnown RBP15.39■□□□□ 0.05
PHRF1-204ENST00000532550 MED13LQ71F56 2210 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 TGDSO95455 350 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 NR2F1P10589 423 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 RYKP34925 604 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 POLR2JP52435 117 aaKnown RBP15.39■□□□□ 0.05
PHRF1-204ENST00000532550 RAC3P60763 192 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 MERTKQ12866 999 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 ANKRD34AQ69YU3 496 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 C3orf33Q6P1S2 294 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 LRRC74BQ6ZQY2 392 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 FCRLAQ7L513 359 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 HDXQ7Z353 690 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 HMGN2P46Q86SG4 172 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 ARFGAP2Q8N6H7 521 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 ANKFN1Q8N957 763 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 DYDC1Q8WWB3 177 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 ITCHQ96J02 903 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 SRXN1Q9BYN0 137 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 QRSL1Q9H0R6 528 aaKnown RBP15.39■□□□□ 0.05
PHRF1-204ENST00000532550 ACER3Q9NUN7 267 aa15.39■□□□□ 0.05
PHRF1-204ENST00000532550 A0A1W2PNR3 127 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 POLR3GO15318 223 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 IL7RP16871 459 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 AGTR1P30556 359 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 APOBEC1P41238 236 aaKnown RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 MAGEA8P43361 318 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 KEAP1Q14145 624 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 GNA13Q14344 377 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 TTMPQ5BVD1 217 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 COX20Q5RI15 118 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 MSANTD1Q6ZTZ1 278 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 PLEKHM3Q6ZWE6 761 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 SLC43A2Q8N370 569 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 FAM71CQ8NEG0 241 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 RNF128Q8TEB7 428 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 ABHD3Q8WU67 409 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 PMM1Q92871 262 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 ZC3HAV1LQ96H79 300 aaKnown RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 OR5B2Q96R09 309 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 FOXC2Q99958 501 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 C12orf49Q9H741 205 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 COQ10BQ9H8M1 238 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 PLEKHF2Q9H8W4 249 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 GP6Q9HCN6 339 aa15.38■□□□□ 0.05
PHRF1-204ENST00000532550 EXOSC3Q9NQT5 275 aaKnown RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 ARGLU1Q9NWB6 273 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 C6orf203Q9P0P8 240 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-204ENST00000532550 HIVEP1P15822 2718 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 RAF1P04049 648 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 YES1P07947 543 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 ZCCHC18P0CG32 403 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 PPP3CBP16298 524 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 ENPP1P22413 925 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 CRATP43155 626 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 STX1BP61266 288 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 C6orf10Q5SRN2 563 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 DNAJC14Q6Y2X3 702 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-204ENST00000532550 ZNF550Q7Z398 422 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 TUSC5Q8IXB3 177 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 CMIPQ8IY22 773 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 OR9I1Q8NGQ6 314 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 VPS33AQ96AX1 596 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 SLC38A1Q9H2H9 487 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 TPT1P8Q9HAU6 139 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 SLCO1B3Q9NPD5 702 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 TCF7L2Q9NQB0 619 aa15.37■□□□□ 0.05
PHRF1-204ENST00000532550 SPIN1Q9Y657 262 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-204ENST00000532550 HRNRQ86YZ3 2850 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-204ENST00000532550 CELSR1Q9NYQ6 3014 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 IGHV3-15A0A0B4J1V0 119 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 FAM234BA2RU67 622 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 AGAP5A6NIR3 686 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 CLDN24A6NM45 220 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 SULT2B1O00204 365 aa15.36■□□□□ 0.05
PHRF1-204ENST00000532550 BCAS1O75363 584 aaPredicted RBP15.36■□□□□ 0.05
PHRF1-204ENST00000532550 DBIP07108 87 aaKnown RBP15.36■□□□□ 0.05
PHRF1-204ENST00000532550 CHRM4P08173 479 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms