RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 GKN3PP0CG01 181 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 PGCP20142 388 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 TGFBR2P37173 567 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 SLC1A3P43003 542 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 GRK6P43250 576 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 NUDT6P53370 316 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 CDH11P55287 796 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 SUMO3P55854 103 aaPredicted RBP11.29□□□□□ -0.6
CHD7-211ENST00000532149 WNT4P56705 351 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 SLC26A5P58743 744 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ACTC1P68032 377 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ACTA1P68133 377 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ERV3-1Q14264 604 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 KCNAB1Q14722 419 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 EBPQ15125 230 aaKnown RBP11.29□□□□□ -0.6
CHD7-211ENST00000532149 TRAM1Q15629 374 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 EMC4Q5J8M3 183 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ADCK1Q86TW2 530 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 GPALPP1Q8IXQ4 340 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 SLC15A4Q8N697 577 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 DTWD2Q8NBA8 298 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 AGBL5Q8NDL9 886 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 OR6S1Q8NH40 331 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 STT3BQ8TCJ2 826 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 DYNC2LI1Q8TCX1 351 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
CHD7-211ENST00000532149 SGTBQ96EQ0 304 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 NUDT22Q9BRQ3 303 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ZPBPQ9BS86 351 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 TAPBPLQ9BX59 468 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 RBCK1Q9BYM8 510 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 OR8D2Q9GZM6 311 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 VN1R1Q9GZP7 353 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 EGLN3Q9H6Z9 239 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 AMBNQ9NP70 447 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 CTPS2Q9NRF8 586 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 FBXO34Q9NWN3 711 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 DHCR7Q9UBM7 475 aaKnown RBP11.29□□□□□ -0.6
CHD7-211ENST00000532149 SIGLEC7Q9Y286 467 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 UNC13CQ8NB66 2214 aa11.29□□□□□ -0.6
CHD7-211ENST00000532149 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 A8MU76 341 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CLDN25C9JDP6 229 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 PRR23D1E9PI22 279 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 M0R082 166 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 BHLHE40O14503 412 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 TSPAN2O60636 221 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CPNE3O75131 537 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 UTS2O95399 124 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 IGKV1D-16P01601 117 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 IGHEP01854 428 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 IGHA1P01876 353 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 LCKP06239 509 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 KLK3P07288 261 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 PRR23D2P0DMB1 279 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 PRG2P13727 222 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CPEP16870 476 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 ZNF12P17014 697 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 ZNF182P17025 639 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 FKBP2P26885 142 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 ATP6V1E1P36543 226 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 PI4KAP42356 2102 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CENPAP49450 140 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CCL7P80098 99 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 TPBGQ13641 420 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 IL10RAQ13651 578 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 ELOA3BQ3SY89 546 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 LCN1P1Q5VSP4 162 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 GUSBP11Q6P575 273 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 CXXC5Q7LFL8 322 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 DND1Q8IYX4 353 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 ELOA3Q8NG57 546 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 OR52I1Q8NGK6 324 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 OR4C3Q8NH37 302 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 IFI44Q8TCB0 444 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 TMEM234Q8WY98 164 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 TTC9Q92623 222 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 TMCO6Q96DC7 493 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 OR6C1Q96RD1 312 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 GPX7Q96SL4 187 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 LPAR4Q99677 370 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CTRCQ99895 268 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms