RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 HHATLQ9HCP6 504 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 UBQLN4Q9NRR5 601 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 DCTN4Q9UJW0 460 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 SNX8Q9Y5X2 465 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 CAPN7Q9Y6W3 813 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 A8MV72 311 aaPredicted RBP15.35■□□□□ 0.05
PKP3-208ENST00000531857 SCDO00767 359 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 SLC22A2O15244 555 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 SSX4O60224 188 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 RSL1D1O76021 490 aaKnown RBP15.35■□□□□ 0.05
PKP3-208ENST00000531857 HPGDP15428 266 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 CALB2P22676 271 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 ZNF117Q03924 483 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 CHRFAM7AQ494W8 412 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 FCRLAQ7L513 359 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 BHLHA15Q7RTS1 189 aaPredicted RBP15.35■□□□□ 0.05
PKP3-208ENST00000531857 CPNE4Q96A23 557 aaPredicted RBP15.35■□□□□ 0.05
PKP3-208ENST00000531857 NSL1Q96IY1 281 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 HS6ST2Q96MM7 605 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 MS4A4EQ96PG1 132 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 POTEKPQ9BYX7 375 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 MYLK2Q9H1R3 596 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 CISD1Q9NZ45 108 aaKnown RBP15.35■□□□□ 0.05
PKP3-208ENST00000531857 NTMQ9P121 344 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 PTGDR2Q9Y5Y4 395 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 PLCE1Q9P212 2302 aa15.35■□□□□ 0.05
PKP3-208ENST00000531857 IGHV4-30-2A0A087WSY4 118 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 IGHV3-15A0A0B4J1V0 119 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 A0A1W2PQD3 144 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 TRPC5OSA6NMA1 111 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 SHISA9B4DS77 424 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 NPIPB8E9PQR5 432 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ZNF195O14628 629 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 PHF1O43189 567 aaPredicted RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 AKAP10O43572 662 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 SEC22BO75396 215 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 PRKD3O94806 890 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 YES1P07947 543 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ENPP1P22413 925 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 EIF1P41567 113 aaKnown RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 RPL14P50914 215 aaKnown RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 AQP5P55064 265 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 C21orf58P58505 322 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ITGADQ13349 1161 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 P2RY6Q15077 328 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 TMEM176BQ3YBM2 270 aaPredicted RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 CBLN3Q6UW01 205 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 MTDHQ86UE4 582 aaKnown RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 MISPQ8IVT2 679 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ARHGAP24Q8N264 748 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ATP6V1C2Q8NEY4 427 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 FBXO27Q8NI29 283 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ZNF524Q96C55 264 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 GATA5Q9BWX5 397 aaPredicted RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 LRMDAQ9H2I8 198 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 COQ10BQ9H8M1 238 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 TIGARQ9NQ88 270 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 PRSS50Q9UI38 385 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 ING1Q9UK53 422 aaPredicted RBP15.34■□□□□ 0.05
PKP3-208ENST00000531857 B3GALT5Q9Y2C3 310 aa15.34■□□□□ 0.05
PKP3-208ENST00000531857 A0A096LNT2 108 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 HDAC3O15379 428 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 CRCPO75575 148 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 LYZL6O75951 148 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 ALOX5P09917 674 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 EFNA1P20827 205 aaPredicted RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 EDNRAP25101 427 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 ELK4P28324 431 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 FRKP42685 505 aaPredicted RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 TOMM34Q15785 309 aaPredicted RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 EXOSC6Q5RKV6 272 aaKnown RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 DTX2Q86UW9 622 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 COX18Q8N8Q8 333 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 ZFP28Q8NHY6 868 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 PHOSPHO1Q8TCT1 267 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 SORT1Q99523 831 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 CCDC28BQ9BUN5 200 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 MMADHCQ9H3L0 296 aaPredicted RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 ALG2Q9H553 416 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 HEATR1Q9H583 2144 aaKnown RBP15.33■□□□□ 0.04
PKP3-208ENST00000531857 REEP4Q9H6H4 257 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 CXorf36Q9H7Y0 433 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 GP6Q9HCN6 339 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 NPAP1Q9NZP6 1156 aa15.33■□□□□ 0.04
PKP3-208ENST00000531857 NBEAL1Q6ZS30 2694 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NPIPA5A0A0B4J1W7 369 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 C9JVG2 144 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NPIPA7E9PJI5 369 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NUDT14O95848 222 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NPIPA8P0DM63 369 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 PRPH2P23942 346 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 PRDX6P30041 224 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 LCN1P31025 176 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NCALDP61601 193 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 STK11Q15831 433 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 NDUFAF6Q330K2 333 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 CLEC6AQ6EIG7 209 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 Q6ZT83 130 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms