RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CCDC36Q8IYA8 594 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ENTHD1Q8IYW4 607 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C17orf78Q8N4C9 275 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FADS6Q8N9I5 356 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FBXL13Q8NEE6 735 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 GLYATL2Q8WU03 294 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RAB1CQ92928 201 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CCDC124Q96CT7 223 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF274Q96GC6 653 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ANKRD36BP1Q96IX9 119 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF514Q96K75 400 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 SENP8Q96LD8 212 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ALKBH7Q9BT30 221 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 GON7Q9BXV9 100 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 NAPBQ9H115 298 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 LHX5Q9H2C1 402 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 UBQLN3Q9H347 655 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FN3KQ9H479 309 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM185BQ9H7F4 350 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MEAF6Q9HAF1 191 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 C20orf96Q9NUD7 363 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CD274Q9NZQ7 290 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 HACD3Q9P035 362 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 Q9UF83 564 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 CHRNA9Q9UGM1 479 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 WARS2Q9UGM6 360 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 APOBEC3BQ9UH17 382 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 IL20RAQ9UHF4 553 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 MGAT4BQ9UQ53 548 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 FAM32AQ9Y421 112 aaKnown RBP2.89□□□□□ -1.95
PTPRK-220ENST00000531466 HYOU1Q9Y4L1 999 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 ERCC6Q03468 1493 aa2.89□□□□□ -1.95
PTPRK-220ENST00000531466 RALGAPA1Q6GYQ0 2036 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NPATQ14207 1427 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MGAT4DA6NG13 374 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 A8MUI8 341 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 LRRN3E7EW58 273 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ITGB1BP1O14713 200 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 BET1O15155 118 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PSMD3O43242 534 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF208O43345 1280 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 B4GAT1O43505 415 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NDUFA2O43678 99 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PFKFB2O60825 505 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 VPS26AO75436 327 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 DEXIO95424 95 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 BAG3O95817 575 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CRYZL1O95825 349 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 GH1P01241 217 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 UGT2B4P06133 528 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 FABP1P07148 127 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 SERPINA6P08185 405 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TNNI1P19237 187 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 FUT1P19526 365 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CD22P20273 847 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PRPS1L1P21108 318 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 UCP1P25874 307 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TIA1P31483 386 aaKnown RBP eCLIP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 IFNA8P32881 189 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NAA10P41227 235 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 KCNJ3P48549 501 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 HNRNPFP52597 415 aaKnown RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CDH4P55283 916 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RGS8P57771 180 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 SPCS3P61009 180 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MAGOHP61326 146 aaKnown RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 GALK2Q01415 458 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MZT1Q08AG7 82 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CDH17Q12864 832 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RCAN2Q14206 197 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 FLOT2Q14254 428 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PIGHQ14442 188 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TMED2Q15363 201 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF506Q5JVG8 444 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CCNJQ5T5M9 372 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PRAMEF5Q5TYX0 476 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 AGBL2Q5U5Z8 902 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PRAMEF6Q5VXH4 476 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 MFSD14CQ5VZR4 134 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC66Q68CR7 880 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 NCR3LG1Q68D85 454 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 OR4C11Q6IEV9 310 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 EMBQ6PCB8 327 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 ENPP7Q6UWV6 458 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TMIGD1Q6UXZ0 262 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC31Q6UY01 552 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 RTL4Q6ZR62 310 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 C3orf62Q6ZUJ4 267 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CYP4V2Q6ZWL3 525 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 SMIM15Q7Z3B0 74 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 PRSS42Q7Z5A4 293 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CDR2LQ86X02 465 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 CLVS1Q8IUQ0 354 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-220ENST00000531466 SERPINA12Q8IW75 414 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 OFCC1Q8IZS5 231 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 TRAM1L1Q8N609 369 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 C19orf18Q8NEA5 215 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 FAM71CQ8NEG0 241 aa2.88□□□□□ -1.95
PTPRK-220ENST00000531466 OR4C5Q8NGB2 326 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms