RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 UBL4AP11441 157 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 DDX5P17844 614 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 IGHV1-2P23083 117 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 ALDH3A1P30838 453 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 CDH11P55287 796 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 CBFBQ13951 182 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 TIGD2Q4W5G0 525 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 XKR7Q5GH72 579 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 DNAJC14Q6Y2X3 702 aaPredicted RBP16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 TOR1AIP2Q8NFQ8 470 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 PPP3R2Q96LZ3 170 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 ALG2Q9H553 416 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 ABCD4O14678 606 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 CFLARO15519 480 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 CYP7B1O75881 506 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 KRT16P08779 473 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 MAPK1P28482 360 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SOAT1P35610 550 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 RPL3P39023 403 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 GPR68Q15743 365 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 C3orf33Q6P1S2 294 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 ZCCHC23Q6ZST2 131 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 LSRQ86X29 649 aaPredicted RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 CLEC4FQ8N1N0 589 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SFXN5Q8TD22 340 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SDF2Q99470 211 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 USB1Q9BQ65 265 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 THUMPD3Q9BV44 507 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SERHL2Q9H4I8 314 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 ATAD3AQ9NVI7 634 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 KCNE5Q9UJ90 142 aa16.28■□□□□ 0.2
SSSCA1-206ENST00000531405 SERINC4A6NH21 518 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 RNF212BA8MTL3 300 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 ETV2O00321 342 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 TLX2O43763 284 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 SSX4O60224 188 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 GPRIN2O60269 458 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 NPHS1O60500 1241 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 SKAP2O75563 359 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 IGHV3-9P01782 118 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 FESP07332 822 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 COX5AP20674 150 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 ARRB2P32121 409 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 SKP2Q13309 424 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 LSM12Q3MHD2 195 aaKnown RBP16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 ATP6AP1LQ52LC2 224 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 IL23RQ5VWK5 629 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 DTX2Q86UW9 622 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 KIF18AQ8NI77 898 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 COQ8BQ96D53 544 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 MUCL1Q96DR8 90 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 DNAJA3Q96EY1 480 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 SLC17A7Q9P2U7 560 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 B3GALT5Q9Y2C3 310 aa16.27■□□□□ 0.2
SSSCA1-206ENST00000531405 MALRD1Q5VYJ5 2156 aa16.27■□□□□ 0.19
SSSCA1-206ENST00000531405 ARFGEF3Q5TH69 2177 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 IGHV4-30-2A0A087WSY4 118 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 FCMRO60667 390 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 GGT1P19440 569 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 DIO1P49895 249 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 SESN3P58005 492 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 HBA1P69905 142 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 SPOCK1Q08629 439 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 MERTKQ12866 999 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 C6orf136Q5SQH8 315 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 TIMM23BQ5SRD1 257 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 GALNT5Q7Z7M9 940 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 HIPK1Q86Z02 1210 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF100Q8IYN0 542 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF433Q8N7K0 673 aaPredicted RBP16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 FNDC5Q8NAU1 212 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 HTRA1Q92743 480 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 APOPT1Q96IL0 206 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 LAT2Q9GZY6 243 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 PPCSQ9HAB8 311 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 BARX1Q9HBU1 254 aaPredicted RBP16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 EML4Q9HC35 981 aaKnown RBP16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 FAIMQ9NVQ4 179 aa16.26■□□□□ 0.19
SSSCA1-206ENST00000531405 SVEP1Q4LDE5 3571 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF724A8MTY0 619 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 LYPLA1O75608 230 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 RAD51DO75771 328 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 UBTFL6P0CB48 400 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 CASP9P55211 416 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 IRX1P78414 480 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 ABLIM2Q6H8Q1 611 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 PHC2Q8IXK0 858 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 RIMKLAQ8IXN7 391 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 CLECL1Q8IZS7 167 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 OR52N5Q8NH56 324 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 MOAP1Q96BY2 351 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 DUSP26Q9BV47 211 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 CACNG6Q9BXT2 260 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 BHLHE41Q9C0J9 482 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms