RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 RASSF1Q9NS23 344 aa12.89□□□□□ -0.35
CTSB-218ENST00000530624 CALML5Q9NZT1 146 aa12.89□□□□□ -0.35
CTSB-218ENST00000530624 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
CTSB-218ENST00000530624 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
CTSB-218ENST00000530624 POLQO75417 2590 aa12.89□□□□□ -0.35
CTSB-218ENST00000530624 A0A096LPI6 279 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 FAAHO00519 579 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 ANP32DO95626 131 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 TFPTP0C1Z6 253 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 NR2F1P10589 423 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 BMP2P12643 396 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
CTSB-218ENST00000530624 SFTPDP35247 375 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 CCR4P51679 360 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 RAC3P60763 192 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
CTSB-218ENST00000530624 GNA13Q14344 377 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 LRIF1Q5T3J3 769 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
CTSB-218ENST00000530624 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 TMEM200AQ86VY9 491 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 RFWD2Q8NHY2 731 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 PNPT1Q8TCS8 783 aaKnown RBP12.88□□□□□ -0.35
CTSB-218ENST00000530624 COQ10BQ9H8M1 238 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 SLC52A3Q9NQ40 469 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 PCDHB14Q9Y5E9 798 aa12.88□□□□□ -0.35
CTSB-218ENST00000530624 HRNRQ86YZ3 2850 aaPredicted RBP12.88□□□□□ -0.35
CTSB-218ENST00000530624 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 EDF1O60869 148 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 BCAS1O75363 584 aaPredicted RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 CYP7B1O75881 506 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SMNDC1O75940 238 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTSB-218ENST00000530624 OPN1LWP04000 364 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 DBIP07108 87 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 ETFAP13804 333 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 CD79BP40259 229 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 APOBEC1P41238 236 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 CRISP3P54108 245 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 DSTNP60981 165 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 FADDQ13158 208 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 ZSWIM7Q19AV6 140 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 TMEM176BQ3YBM2 270 aaPredicted RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 GTDC1Q4AE62 458 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 C6orf10Q5SRN2 563 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 GRINAQ7Z429 371 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SLC43A2Q8N370 569 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 QRSL1Q9H0R6 528 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 OPN3Q9H1Y3 402 aaPredicted RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 RAD21L1Q9H4I0 556 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 RABEP2Q9H5N1 569 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SERINC1Q9NRX5 453 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 DNAJB12Q9NXW2 375 aaKnown RBP12.87□□□□□ -0.35
CTSB-218ENST00000530624 NDRG3Q9UGV2 375 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 TESMINQ9Y4I5 508 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 HEATR5AQ86XA9 2040 aa12.87□□□□□ -0.35
CTSB-218ENST00000530624 SH3D21A4FU49 640 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 CLDN24A6NM45 220 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 PLGP00747 810 aaPredicted RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 IL7RP16871 459 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 AGTR1P30556 359 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SLC7A1P30825 629 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 CRATP43155 626 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 HTR3AP46098 478 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 CTBP2P56545 445 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SIRPAP78324 504 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 FAM27E3Q08E93 113 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SQLEQ14534 574 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 RGNQ15493 299 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SLC2A7Q6PXP3 512 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 PEX5LQ8IYB4 626 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 ZNF440Q8IYI8 595 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SLC38A5Q8WUX1 472 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SPDL1Q96EA4 605 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 AURKBQ96GD4 344 aaPredicted RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 REXO5Q96IC2 774 aaKnown RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 GPATCH1Q9BRR8 931 aaKnown RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 POLDIP3Q9BY77 421 aaKnown RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 CLEC4MQ9H2X3 399 aaPredicted RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 CCDC167Q9P0B6 97 aa12.86□□□□□ -0.35
CTSB-218ENST00000530624 SPIN1Q9Y657 262 aaPredicted RBP12.86□□□□□ -0.35
CTSB-218ENST00000530624 TRBV5-3A0A0A0MS03 114 aa12.85□□□□□ -0.35
CTSB-218ENST00000530624 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
CTSB-218ENST00000530624 A0A1W2PP18 115 aa12.85□□□□□ -0.35
CTSB-218ENST00000530624 CDHR4A6H8M9 788 aa12.85□□□□□ -0.35
CTSB-218ENST00000530624 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms