RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SOX14O95416 240 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 NGFRP08138 427 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 PTNP21246 168 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 POU1F1P28069 291 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 GGT2P36268 569 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 OMPP47874 163 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CCL11P51671 97 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CRISP1P54107 249 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CXADRP78310 365 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 COX10Q12887 443 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 KCTD21Q4G0X4 260 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 FCRLBQ6BAA4 426 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 WDR88Q6ZMY6 472 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CCDC71Q8IV32 467 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 NRMQ8IXM6 262 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 FAM46AQ96IP4 442 aaKnown RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 EXOSC3Q9NQT5 275 aaKnown RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 BATF3Q9NR55 127 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CARD8Q9Y2G2 431 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 CHD8Q9HCK8 2581 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 A6NL46 340 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 ALG1L2C9J202 215 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 H3BN98 237 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 CHP2O43745 196 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 MAN1A2O60476 641 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 NADKO95544 446 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-216ENST00000530004 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-216ENST00000530004 NUP107P57740 925 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 MLF1P58340 268 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 SKP2Q13309 424 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 ALG10BQ5I7T1 473 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 C6orf141Q5SZD1 244 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 CD300LDQ6UXZ3 194 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 LSRQ86X29 649 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-216ENST00000530004 TMCO5AQ8N6Q1 288 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 FAM81AQ8TBF8 368 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 FBLIM1Q8WUP2 373 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 RTN4RQ9BZR6 473 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 DMXL2Q8TDJ6 3036 aa13.15□□□□□ -0.3
TTC39A-216ENST00000530004 ZAR1LA6NP61 321 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 NDUFB5O43674 189 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 ITGA10O75578 1167 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 OR2J2O76002 312 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 LINGO3P0C6S8 592 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 ATP6V1B1P15313 513 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 GSTM3P21266 225 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 EVI2BP34910 448 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 IDH2P48735 452 aaKnown RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 CCR4P51679 360 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 FBXW4P57775 412 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 COPZ1P61923 177 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 ALDH6A1Q02252 535 aaKnown RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 TSPAN31Q12999 210 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 CDK5R2Q13319 367 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 EFR3AQ14156 821 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 ACER2Q5QJU3 275 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 CBLN3Q6UW01 205 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 TSPAN14Q8NG11 270 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 OR5M3Q8NGP4 307 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 CNIH3Q8TBE1 160 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 UBE2FQ969M7 185 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 MRPS26Q9BYN8 205 aaKnown RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF552Q9H707 407 aaPredicted RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 KRCC1Q9NPI7 259 aaPredicted RBP13.15□□□□□ -0.31
TTC39A-216ENST00000530004 RASSF1Q9NS23 344 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 GPR83Q9NYM4 423 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 AASSQ9UDR5 926 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.31
TTC39A-216ENST00000530004 SCO2O43819 266 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 FADS1O60427 444 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 CEACAM4O75871 244 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 TP53P04637 393 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-216ENST00000530004 GPR4P46093 362 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 CDH15P55291 814 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-216ENST00000530004 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
TTC39A-216ENST00000530004 LAIR2Q6ISS4 152 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 ULK3Q6PHR2 472 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 RNF113BQ8IZP6 322 aaKnown RBP13.14□□□□□ -0.31
TTC39A-216ENST00000530004 FDCSPQ8NFU4 85 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms