RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475		J3QLW9	94 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	SOX30	O94993	753 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	PEPD	P12955	493 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZNF19	P17023	458 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	BTC	P35070	178 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	SEC13	P55735	322 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	PPP2CB	P62714	309 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	PPP2CA	P67775	309 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	CLPP	Q16740	277 aa	Predicted RBP	21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	LAMTOR1	Q6IAA8	161 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	GHDC	Q8N2G8	530 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	HOXB13	Q92826	284 aa	Predicted RBP	21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	HYLS1	Q96M11	299 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZNF426	Q9BUY5	554 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	FBRS	Q9HAH7	460 aa		21.62	■■□□□ 1.05
GSDMD-208	ENST00000528475	GOLGA4	Q13439	2230 aa	Known RBP	21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	TRAV1-2	A0A0B4J238	106 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	SLC9B1P1	A6NJY1	282 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	CYR61	O00622	381 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	OR2B3	O76000	313 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	MRPL3	P09001	348 aa	Known RBP	21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	EVI2B	P34910	448 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	RBM34	P42696	430 aa	Known RBP	21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	SLC16A1	P53985	500 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	GAS6	Q14393	721 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	ACSM3	Q53FZ2	586 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	FIGNL1	Q6PIW4	674 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	CTHRC1	Q96CG8	243 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	LRFN5	Q96NI6	719 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	GABRG3	Q99928	467 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZFYVE21	Q9BQ24	234 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	MFRP	Q9BY79	579 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	SLC6A17	Q9H1V8	727 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	MRPL39	Q9NYK5	338 aa	Known RBP	21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	ACTR10	Q9NZ32	417 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	ST6GALNAC2	Q9UJ37	374 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	NCKAP1	Q9Y2A7	1128 aa		21.61	■■□□□ 1.05
GSDMD-208	ENST00000528475	TRAV27	A0A087WT01	109 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	LOC105369274	A0A096LPK9	316 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	FZD7	O75084	574 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	LDB3	O75112	727 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	RFPL3	O75679	317 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	NKX2-2	O95096	273 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	GUSB	P08236	651 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	OR12D2	P58182	307 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	CCDC85B	Q15834	202 aa	Predicted RBP	21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	BTBD16	Q32M84	506 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	FAAH2	Q6GMR7	532 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ARHGAP11A	Q6P4F7	1023 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	RTL4	Q6ZR62	310 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ASB18	Q6ZVZ8	466 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZNF767P	Q75MW2	155 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	GRAMD2A	Q8IUY3	354 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	OR4N4	Q8N0Y3	316 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	WDR92	Q96MX6	357 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ABHD1	Q96SE0	405 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	MTIF3	Q9H2K0	278 aa	Known RBP	21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZCCHC4	Q9H5U6	513 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	MRPS2	Q9Y399	296 aa	Known RBP	21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ZNF860	A6NHJ4	632 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	PPP1R3D	O95685	299 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	DHFR	P00374	187 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	SERPINA3	P01011	423 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	IFNG	P01579	166 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	RAB3B	P20337	219 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	NTSR1	P30989	418 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	GDI1	P31150	447 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	SLC6A6	P31641	620 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	GABRA3	P34903	492 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ACTR1B	P42025	376 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	ACTR1A	P61163	376 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	TMEM52	Q8NDY8	209 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	OR7G1	Q8NGA0	311 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	DOK4	Q8TEW6	326 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	SCMH1	Q96GD3	660 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475	SERTAD3	Q9UJW9	196 aa		21.6	■■□□□ 1.05
GSDMD-208	ENST00000528475		A0A0A6YYJ9	748 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	GXYLT2	A0PJZ3	443 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475		H0YGG7	62 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	OGG1	O15527	345 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	EEF1E1	O43324	174 aa	Known RBP	21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	APBB3	O95704	486 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	CLU	P10909	449 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	ARF3	P61204	181 aa	Predicted RBP	21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	NTRK2	Q16620	822 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	TMEM196	Q5HYL7	178 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	MANEA	Q5SRI9	462 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	OR51A7	Q8NH64	312 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	CCL4L1	Q8NHW4	92 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	KXD1	Q9BQD3	176 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	DZANK1	Q9NVP4	752 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	FLRT3	Q9NZU0	649 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	ABRACL	Q9P1F3	81 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	COL4A2	P08572	1712 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	ERVH48-1	M5A8F1	160 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	HYAL3	O43820	417 aa	Predicted RBP	21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	POLR2C	P19387	275 aa	Predicted RBP	21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	FHL1	Q13642	323 aa		21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	EXOSC7	Q15024	291 aa	Known RBP	21.59	■■□□□ 1.05
GSDMD-208	ENST00000528475	SLC25A35	Q3KQZ1	300 aa		21.59	■■□□□ 1.05

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms